Some of our published papers
2022
Nikitushkin V, Shleeva M, Loginov D, Dyčka F, Sterba J, Kaprelyants A. Shotgun proteomic profiling of dormant, ‘non-culturable’ Mycobacterium tuberculosis. PLOS ONE. 2022. accepted
Selinger M, Věchtová P, Tykalová H, Ošlejšková P, Rumlová M, Štěrba J, Grubhoffer L. Integrative RNA profiling of TBEV-infected neurons and astrocytes reveals potential pathogenic effectors. Computational and Structural Biotechnology Journal. 2022. 20:2759-2777. https://doi.org/10.1016/j.csbj.2022.05.052
2021
Jiří Kratochvíl, Vadym Prysiazhnyi, Filip Dyčka, Ondřej Kylián, Peter Kúš, Petr Sezemský, Ján Štěrba, Vítězslav Straňák. Gas aggregated Ag nanoparticles as the inorganic matrix for laser desorption/ionization mass spectrometry. Applied Surface Science. 2021, 541, 148469. https://doi.org/10.1016/j.apsusc.2020.148469
Rusanov AL, Kozhin PM, Tikhonova OV, Zgoda VG, Loginov DS, Chlastáková A, Selinger M, Sterba J, Grubhoffer L, Luzgina NG. Proteome profiling of PMJ2-R and primary peritoneal macrophages. International Journal of Molecular Sciences. 2021; 22(12):6323. https://doi.org/10.3390/ijms22126323
Azinfar A, Nueber S, Vancova M, Sterba J, Stranak V, Helm C. Self-patterning polyelectrolyte multilayer films: influence of deposition steps and drying in vacuum. Langmuir. 2021; Accepted. https://doi.org/10.1021/acs.langmuir.1c01409
Hejduk L, Rathner P, Strnad M, Grubhoffer L, Sterba J, Rego ROM, Müller N, Rathner A. Resonance assignment and secondary structure of DbpA protein from the European species, Borrelia afzelii. Biomol NMR Assign 2021, 15(2), 415-420. https://doi.org/10.1007/s12104-021-10039-2
Forinová, Michala; Pilipenco, Alina; Víšová, Ivana; Lynn Jr., N. Scott; Dostalek, Jakub; Mašková, Hana; Hönig, Václav; Palus, Martin; Selinger, Martin; Kočová, Pavlína ; Dyčka, Filip; Štěrba, Jan; Houska, Milan; Vrabcová, Markéta; Horák, Petr; Anthi, Judita; Tung, Chao-Ping; Yu, Chung-Ming; Chen, Chi-Yung ; Huang, Yu-Chuan; Tsai, Pei-Hsun; Lin, Szu-Yu; Hsu, Hung-Ju; Yang, An-Suei; Dejneka, Alexandr; Vaisocherová-Lísalová, Hana. Functionalized terpolymer brush-based biointerface with improved antifouling properties for ultra-sensitive direct detection of virus in crude clinical samples. ACS Applied Materials & Interfaces, 2021, 13, 60612-60624. https://doi.org/10.1021/acsami.1c16930
Štěrbová J., Kočová P., Pekarek L. Selinger M., Ondrus J. Grubhoffer L., Štěrba J. Click-on-membrane for detection of metabolically labelled proteins and RNA. Chemické listy, 2021, 115: 662-668.
2020
K. Kotsarenko, P. Vechtova, Z. Hammerova, N. Langova, L. Malinovska, M. Wimmerova, J. Sterba, and L. Grubhoffer. Newly identified DNA methyltransferases of Ixodes ricinus ticks. Ticks and tick-borne diseases, 2020, 11:101348. https://doi.org/10.1016/j.ttbdis.2019.101348
Rusanov AR, Stepanov AA, Zgoda V, Kaysheva A, Selinger M, Maskova H, Lginov D, Sterba J, Grubhoffer L, Luzgina NG. Proteome dataset of mouse macrophage cell line infected with tick-borne encephalitis virus. Data in Brief. 2020, 28:105029. https://doi.org/10.1016/j.dib.2019.105029
Loginov DS, Böttinger K, Loginova YF, Dycka F, Vechtova P, Sterba J. Biotyping of IRE/CTVM19 tick cell line infected by tick-borne encephalitis virus. Ticks Tick Borne Dis. 2020;11(4):101420. https://doi:10.1016/j.ttbdis.2020.101420
Vaidulych M, Pleskunov P, Kratochvíl J, Mašková H, Kočová P, Nikitin D, Hanuš J, Kylián O, Štěrba J, Biederman H, Choukourov, A. Convex vs concave surface nano-curvature of Ta2O5 thin films for tailoring the osteoblast adhesion, Surface and Coatings Technology, 2020, 393, 125805. https://doi.org/10.1016/j.surfcoat.2020.125805.
Vechtova P, Fussy Z, Cegan R, Sterba J, Erhart J, Benes V, Grubhoffer L. Catalogue of stage-specific transcripts in Ixodes ricinus and their potential functions during the tick life-cycle. Parasites Vectors 13, 311 (2020). https://doi.org/10.1186/s13071-020-04173-4
Kotsarenko K, Vechtova P, Lieskovska J, Füssy Z, Cabral-de-Mello D, Rego R, Alberdi P, Collins M, Bell-Sakyi L, Sterba J, Grubhoffer L. Karyotype changes in long-term cultured tick cell lines, Scientific Reports 2020, 10, 13443. https://doi.org/10.1038/s41598-020-70330-5
2019
Dzyuba V, Sampels S, Ninhaus-Silveira A, Kahanec M, Veríssimo-Silveira R, Rodina M, Cosson J, Boryshpolets J, Selinger M, Sterba J, Dzyuba B, Sperm motility and lipid composition in internally fertilizing ocellate river stingray Potamotrygon motoro. Theriogenology, 2019, 130: 26-35. https://doi.org/10.1016/j.theriogenology.2019.02.029.
Vaidulych M, Shelemin A, Hanuš J, Khalakhan I, Krakovsky I, Kočová P, Mašková H, Kratochvíl J, Pleskunov P, Štěrba J, Kylián O, Choukourov A, Biederman H, Superwettable antibacterial textiles for versatile oil/water separation. Plasma Process Polym. 2019;e1900003. http://dx.doi.org/10.1002/ppap.201900003
Loginov DS, Loginova YF, Dycka F, Böttinger K, Vechtova P, Sterba J. Tissue-specific signatures in tick cell line MS profiles. Parasit Vectors, 2019, 12:212. https://doi.org/10.1186/s13071-019-3460-5.
Xin M, Niksirat H, Shaliutina-Kolesova A, Siddique MAM, Sterba J, Boryshpolets S, Linhart O. Molecular and subcellular cryoinjury of fish spermatozoa and approaches to improve cryopreservation. Reviews in Aquaculture, 2019, , https://doi.org/10.1111/raq.12355
Kratochvíl J, Kahoun D, Kylián O, Štěrba J, Kretková T, Kousal J, Hanuš J, Vaclová J, Prysiazhnyi V, Sezemský P, Fojtíková P, Lieskovská J, Langhansová H, Krakovský I, Straňák V. Nitrogen enriched C:H:N:O thin films for improved antibiotics doping. Applied Surface Science, 2019, 494, 301-308. ISSN 0169-4332, https://doi.org/10.1016/j.apsusc.2019.07.135
Selinger M, Tykalová H, Štěrba J, Věchtová P, Vavrušková Z, Lieskovská J, Kohl A, Schnettler E, GrubhofferL. Tick-borne encephalitis virus inhibits rRNA synthesis and host protein production in human cells of neural origin. PLoS Negl Trop Dis, 2019, 13:e0007745. https://doi.org/10.1371/journal.pntd.0007745
Xin, M.; Vechtova, P.; Shaliutina-Kolesova, A.; Fussy, Z.; Loginov, D.; Dzyuba, B.; Linhart, O.; Boryshpolets, S.; Rodina, M.; Li, P.; Loginova, Y.; Sterba, J. Transferrin Identification in Sterlet (Acipenser ruthenus) Reproductive System. Animals 2019, 9, 753. https://doi.org/10.3390/ani9100753
Prysiazhnyi V., Dycka F. Kratochvil J., Sterba, J. Stranak V. Gas-aggregated Ag nanoparticles for detection of small molecules using LDI MS. Analytical and Bioanalytical Chemistry. 2019, 412, 1037-1047. doi: https://doi.org/10.1007/s00216-019-02329-5
2018
Kratochvíl J, Kahoun D, Štěrba J, Langhansová H, Lieskovská J, Fojtíková P, Hanuš J, Kousal J, Kylián O, Straňák V. Plasma polymerized C:H:N:O thin films for controlled release of antibiotic substances. Plasma Process Polym. 2018; 15:e1700160. 10.1002/ppap.201700160
Xin M, Shaliutina-Kolesova A, Sterba J, Konik P, Boryshpolets S, Rodina M, Li P, Nian R, Linhart O. Impact of cryopreservation on sterlet, Acipenser ruthenus sperm motility and proteome. Animal Reproduction Science, 2018, 192, 280-9. https://doi.org/10.1016/j.anireprosci.2018.03.025
Kratochvíl J, Štěrba J, Lieskovská J, Langhansová H, Kuzminova A, Khalakhan I, Kylián O, Straňák V. Antibacterial effect of Cu/C:F nanocomposites deposited on PEEK substrates, Materials Letters, 2018, 230, 69-99. doi: https://doi.org/10.1016/j.matlet.2018.07.082
Xin, M., Sterba, J., Shaliutina-Kolesova, A. Dzyuba B, Lieskovska J, Boryshpolets S, Siddique MAM, Kholodnyy V, Lebeda I, Linhart O. Protective role of antifreeze proteins on sterlet (Acipenser ruthenus) sperm during cryopreservation. Fish Physiol Biochem, 2018, 44: 1527-33. https://doi.org/10.1007/s10695-018-0538-5
Dominik Schwarz, Amelie K.J. Schoenenwald, Jörg Dörrstein, Jan Sterba, David Kahoun, Pavla Fojtíková, Josef Vilímek, Doris Schieder, Cordt Zollfrank, Volker Sieber, Biosynthesis of poly-3-hydroxybutyrate from grass silage by a two-stage fermentation process based on an integrated biorefinery concept, Bioresource Technology, 2018, 269, 237-245. https://doi.org/10.1016/j.biortech.2018.08.064
Vechtova P, Sterbova J., Sterba J, Vancova M, Rego ROM, Selinger M, Strnad M, Golovchenko M, Rudenko N, Grubhoffer L, A bite so sweet: the glycobiology interface of tick-host-pathogen interactions. Parasit Vectors, 2018, 11:594. https://doi.org/10.1186/s13071-018-3062-7
Kotsarenko K.V., Lylo V. V., Ruban T. P., Macewicz L.L, Lukash L.L. Effect of some biological agents on expression of the repair enzyme MGMT and the anti-Methyltransferase Antibody Recognizable Protein MARP in human cells in vitro // Biochemical Genetics. 2018. - Volume 56. - P. 459–477. https://doi.org/10.1007/s10528-018-9854-9.
2017
Selinger M, Wilkie GS, Tong L, Gu Q, Schnettler E, Grubhoffer L, Kohl A. (2017) Analysis of tick-borne encephalitis virus-induced host responses in human cells of neuronal origin and interferon-mediated protection. Appl Environ Microbiol. 83(15). https://doi.org/10.1099/jgv.0.000853
2016
Černý J, Selinger M, Palus M, Vavrušková Z, Tykalová H, Bell-Sakyi L, Štěrba J, Grubhoffer L, Růžek D.: Expression of a second open reading frame present in the genome of tick-borne encephalitis virus strain Neudoerfl is not detectable in infected cells. Virus Genes 2016, 1-8. 10.1007/s11262-015-1273-y
Dzyuba V, Słowińska M, Cosson J, Boryshpolets S, Štĕrba J, Rodina M, Linhart O, Dzyuba B.: Characterization of proteolytic and anti-proteolytic activity involvement in sterlet spermatozoon maturation. Fish Physiol Biochem, 2016, 42, 1755-66. 10.1007/s10695-016-0255-x
Shaliutina-Kolešová A, Kotas P, Štěrba J, Rodina M, Dzyuba B, Cosson J, Linhart O.: Protein profile of seminal plasma and functionality of spermatozoa during the reproductive season in the common carp (Cyprinus carpio) and rainbow trout (Oncorhynchus mykiss). Mol Reprod Develop, 2016, 83: 968-982. 10.1002/mrd.22737.
2015
Villar M, Ayllón N, Kocan KM, Bonzón-Kulichenko E, Alberdi P, Blouin EF, Weisheit S, Mateos-Hernández L, Cabezas-Cruz A, Bell-Sakyi L, Vancová M, Bílý T, Meyer DF, Sterba J, Contreras M, Rudenko N, Grubhoffer L, Vázquez J, de la Fuente J. Identification and characterization of Anaplasma phagocytophilum proteins involved in infection of the tick vector, Ixodes scapularis. PLoS One. 2015, 10, e0137237. 10.1371/journal.pone.0137237
Hönig V, Svec P, Halas P, Vavruskova Z, Tykalova H, Kilian P, Vetiskova V, Dornakova V, Sterbova J, Simonova Z, Erhart J, Sterba J, Golovchenko M, Rudenko N, Grubhoffer L.: Ticks and tick-borne pathogens in South Bohemia (Czech Republic) - Spatial variability in Ixodes ricinus abundance, Borrelia burgdorferi and tick-borne encephalitis virus prevalence. Ticks Tick Borne Dis, 2015, 6, 559-67. 10.1016/j.ttbdis.2015.04.010
2014
Sterba J., Vancova M., Sterbova J., Bell-Sakyi L., Grubhoffer L.: The majority of sialylated glycoproteins in adult Ixodes ricinus ticks originate in the host, not the tick. Carbohydrate Research, 2014, 389, 93-99. 10.1016/j.carres.2014.02.017