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Přírodovědecká fakulta JU

PRF

Napsáno dne . Zveřejněno v PRF.

Publikace

Katedra molekulární biologie a genetiky

Výběr publikací vědeckých skupin Katedry molekulární biologie a genetiky

(studenti a doktorandi katedry vyznačeni tučně)

2024

Gabriela Krejčová, Gabriela Ruphuy, Petra Šalamúnová, Erik Sonntag, František Štěpánek, Adam Bajgar Inhibition of mevalonate pathway by macrophage-specific delivery of atorvastatin prevents their pro-inflammatory polarisation Insect Molecular Biology https://doi.org/10.1111/imb.12900

Fessl T., Majellaro M., Bondar A. Microscopy and spectroscopy techniques to study GPCR structure and function British Journal of Pharmacology https://doi.org/10.1111/bph.16297

Majellaro M., Bondar A. Editorial: Advanced biophysical and biochemical technologies to study GPCR signal transduction. Frontiers in Endocrinology https://doi.org/10.3389/fendo.2023.1354689

Monika Fluks, Rebecca Collier, Agnieszka Walewska, Alexander W. Bruce, Anna Ajduk How great thou ART: biomechanical properties of oocytes and embryos as indicators of quality in assisted reproductive technologies Frontiers in Cell and Developmental Biology https://doi.org/10.3389/fcell.2024.1342905

Svobodová K., Krištůfek V., Kubásek J., Krejčí A. Alcohol extract of the gypsy mushroom (Cortinarius caperatus) inhibits the development of Deformed wing virus infection in western honey bee (Apis mellifera) Journal of Insect Physiology https://doi.org/10.1016/j.jinsphys.2023.104583

Butenko A., Lukeš J., Speijer D., Weideman J.G. Mitochondrial genomes revisited: Why dodifferent lineages retain different genes? BMC Biology https://doi.org/10.1186/s12915-024-01824-1

Opperdoes F.R., Záhonová K., Škodová-Sveráková I., Bučková B., Chmelová L., Lukeš J., Yurchenko V. In silico prediction of the metabolism of Blastocrithidia nonstop, a trypanosomatid with non-canonical genetic code BMC Genomics https://doi.org/10.1186/s12864-024-10094-8

Lukeš J., Čepička I., Kolísko M. Evolution: No end in sight for novel incredible (heterotrophic) protists Current Biology https://doi.org/10.1016/j.cub.2023.10.065

Pablo Mora, Monika Hospodářská, Anna Chung Voleníková, Petr Koutecký, Jana Štundlová, Martina Dalíková, James R. Walters, Petr Nguyen Sex-biased gene content is associated with sex chromosome turnover in Danaini butterflies Molecular Ecology https://doi.org/10.1111/mec.17256

Skotnicová P., Srivastava A., Aggarwal D., Talbot J., Karlínová I., Moos M., Mareš J., Bučinská L., Koník P., Šimek P., Tichý M., Sobotka R. A thylakoid biogenesis BtpA protein is required for the initial step of tetrapyrrole biosynthesis in cyanobacteria New Phytologist https://doi.org/10.1111/nph.19397

Cadena L.R., Edgcomb V., Lukeš J. Gazing into the abyss: A glimpse into the diversity, distribution, and behaviour of heterotrophic protists from the deep-sea floor Environmental Microbiology https://doi.org/10.1111/1462-2920.16598

del Campo J., Carlos-Oliveira M., Čepička I., Hehenberger E., Horák A., Karnkowska A., Kolísko M., Lara E., Lukeš J., Pánek T., Piwosz K., Richter D.J., Škaloud P., Šuťák R., Tachezy J., Hampl V. The protist cultural renaissance Trends in Microbiology https://doi.org.10.1016/j.tim.2023.11.010

Kostygov A., Albanaz A.T.S., Butenko A., Gerasimov E.S., Lukeš J., Yurchenko V. Phylogenetic framework to explore trait evolution in Trypanosomatidae Trends in Parasitology https://doi.org/10.1016/j.pt.2023.11.009

Volf M., Fontanilla A., Vanhakylä S., Abe T., Libra M., Kogo R., Lilip R., Kamata N., Murakami M., Novotný V., Salminen J.-P., Segar S.T. High intraspecific variability and previous experience affect polyphenol metabolism in polyphagous Lymantria mathura caterpillars Ecology and Evolution https://doi.org/10.1002/ece3.10973

Andresen E., Morina F., Bokhari S. N. H., Koník P., Küpper H. Disturbed electron transport beyond PSI changes metabolome and transcriptome in Zn-deficient soybean Biochimica et Biophysica Acta (BBA) - Bioenergetics https://doi.org/10.1016/j.bbabio.2023.149018

Colussi A., Bokhari S. N. H., Mijovilovich A. E., Koník P., Küpper H. Acclimation to medium-level non-lethal iron limitation: Adjustment of electron flow around the PSII and metalloprotein expression in Trichodesmium erythraeum IMS101 Biochimica et Biophysica Acta (BBA) - Bioenergetics research DOI: 10.1016/j.bbabio.2023.149015
Oborník M., Füssy Z. Complex Endosymbioses I: From Primary to Complex Plastids, Serial Endosymbiotic Events Methods in Molecular Biology: Plastids DOI: 10.1007/978-1-0716-3726-5_2
Urbanová V., Lu S., Kalinová E., Martins L., Kozelková T., Dycka F., Ribeiro J., Hajdušek O., Perner J., Kopáček P. From the fat body to the hemolymph: Profiling tick immune and storage proteins through transcriptomics and proteomics Insect Biochemistry and Molecular Biology research DOI: 10.1016/j.ibmb.2024.104072
Ellen McMullen, Lukas Strych, Lenka Chodakova, Amber Krebs & Tomas Dolezal JAK/STAT mediated insulin resistance in muscles is essential for effective immune response Cell Communication and Signaling research https://doi.org/10.1186/s12964-024-01575-0
Gabriela Krejčová, Adéla Danielová, Hana Sehadová, Filip Dyčka, Jiří Kubásek, Martin Moos, and Adam Bajgar Macrophages play a nutritive role in post-metamorphic maturation in Drosophila Develeopment research https://doi.org/10.1242/dev.202492
Afonin D.A., Gerasimov E.S., Škodová-Sveráková I., Záhonová K., Gahura O., Albanaz A.T.S., Myšková E., Bykova A., Paris Z., Lukeš J., Opperdoes F.R., Horváth A., Zimmer S., Yurchenko V. Blastocrithidia nonstop mitochondrial genome and its expression are remarkably insulated from nuclear codon reassignment Nucleic Acid Research research https://doi.org/10.1093/nar/gkae168
Kazek, M., Chodáková, L., Lehr, K., Strych L, Nedbalová, P., McMullen, E., Bajgar, A., Opekar, S., Šimek, P., Moos M., Doležal, T. Glucose and trehalose metabolism through the cyclic pentose phosphate pathway shapes pathogen resistance and host protection in Drosophila PLoS Biology research https://doi.org/10.1371/journal.pbio.3002299
Bartošová-Sojková P., Butenko A., Richtová J., Fiala I., Oborník M., Lukeš J. Inside the host: understanding the evolutionary trajectories of intracellular parasitism ANNUAL REVIEW OF MICROBIOLOGY https://doi.org/10.1146/annurev-micro-041222-025305

2023

Smykal V, Chodakova L, Hejnikova M, Briedikova K, Wu BCH, Vaneckova H, Chen P, Janovska A, Kyjakova P, Vacha M, Dolezel D. (2023) Steroid receptor coactivator TAIMAN is a new modulator of insect circadian clock. PLOS Genetics 19(9): e1010924. doi.org/10.1371/journal.pgen.1010924

Krejčová G, Morgantini C, Zemanová H, Lauschke VM, Kovářová J, Kubásek J, Nedbalová P, Kamps-Hughes N, Moos M, Aouadi M, Doležal T and Bajgar A. (2023) Macrophage-derived insulin antagonist ImpL2 induces lipoprotein mobilization uponbacterial infection. The EMBO Journal. e114086|2023. doi.10.15252/embj.2023114086

Gahurova L, Tomankova J, Cerna P, Bora P, Kubickova M, Virnicchi G, Kovacovicova K, Potesil D, Hruska P, Zdrahal Z, Anger M, Susor A, Bruce AW. (2023) Spatial positioning of preimplantation mouse embryo cells is regulated by mTORC1 and m7G-cap-dependent translation at the 8- to 16-cell transition. Open Biology. doi.org/10.1098/rsob.230081

Svobodová K, Maitre A, Obregón D, Wu-Chuang A, Thaduri S, Locke B, de Miranda JR, Mateos-Hernández L, Bruce Krejčí A, Cabezas-Cruz A. (2023) Gut microbiota assembly of Gotland varroa-surviving honey bees excludes major viral pathogens. Microbiological Research. 274:127418. doi.org/10.1016/j.micres.2023.127418

Jayakodi M, Golicz AA, Kreplak J, Fechete LI, ..., Koblížková A, Neumann P, Novák P, Avila Robledillo L, Macas J, et al. (2023) The giant diploid faba genome unlocks variation in a global protein crop Nature 615 (7953): 652–659. doi:10.1038/s41586-023-05791-5

Macas J, Avila Robledillo L, Kreplak J, Novák P, Koblížková A, Vrbová I, Burstin J, Neumann P. (2023) Assembly of the 81.6 Mb centromere of pea chromosome 6 elucidates the structure and evolution of metapolycentric chromosomes. PLoS Genetics 19(2): e1010633. doi:10.1371/journal.pgen.1010633

Zeiner A, Colina F, Citterico M, Wrzaczek M. (2023) CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASES: their evolution, structure, and roles in stress response and development. Journal of Experimental Botany on-line first: doi:10.1093/jxb/erad236

Bruce Krejčí A, Votýpková K, Lukeš J, Votýpka J. (2023) Varroa destructor Trends in Parasitology 39: 487-488. doi:10.1016/j.pt.2023.03.009

Ho Chan T, Picard-Sánchez M, Majstorović J, Rebl A, Koczan D, Dycka F, Holzer A, Korytář T. (2023) Red blood cells in proliferative kidney disease-rainbow trout (Oncorhynchus mykiss) infected by Tetracapsuloides bryosalmonae harbor IgM(+) red blood cells Frontiers in Immunology 14: 1041325. doi:10.3389/fimmu.2023.1041325

Kachale A, Pavliková Z, Nenarokova A, Roithová A, Durante I, Miletínová P, Záhonová K, Nenarokov S, Votýpka J, Horáková E, Ross RL, Yurchenko V, Beznosková P, Paris Z, Valášek LS, Lukeš J. (2023) Short tRNA anticodon stem and mutant eRF1 allow stop codon reassignment Nature 613: 751–758. doi:10.1038/s41586-022-05584-2

Muñoz-Gómez SA, Cadena L, Gardiner AT, Leger MM, Sheikh S, Connell LB, Bílý T, Kopejtka K, Beatty T, Koblížek M, Roger A, Slamovits CH, Lukeš J, Hashimi H. (2023) Intracytoplasmic-membrane development in alphaproteobacteria involves the homolog of the mitochondrial crista-developing protein Mic60. Current Biology 33: 1099 - 1111. doi: 10.1016/j.cub.2023.02.059

Obiol A, López-Escardó D, Salomaki E, Wisniewska M, Forn I, Sà E, Vaqué D, Kolísko M, Massana R. (2023) Gene expression dynamics of natural assemblages of heterotrophic flagellates during bacterivory Microbiome 11: 134. doi:10.1186/s40168-023-01571-5

Sheikh S, Pánek T, Gahura O, Týč J, Záhonová K, Lukeš J, Eliáš M, Hashimi H. (2023) A novel group of dynamin-related proteins shared by eukaryotes and giant viruses is able to remodel mitochondria from within the matrix Molecular Biology and Evolution 40: msad134. doi:10.1093/molbev/msad134

Wong J, Panicucci Zíková A, Gahura O. (2023) The ancestral shape of the access proton path of mitochondrial ATP synthases revealed by a split subunit-a. Molecular Biology and Evolution 40: msad146. doi: 10.1093/molbev/msad146

Bajgar A, Krejčová G. (2023) On the origin of macrophage functional versatility. Frontiers in Physiology 14:1128984. doi: 10.3389/fphys.2023.1128984

Dalíková M, Provazníková I, Provazník J, Grof-Tisza P, Pepi A, Nguyen P. (2023) The role of repetitive sequences in repatterning of major ribosomal DNA clusters in Lepidoptera. Genome Biology and Evolution 15: evad090. doi:10.1093/gbe/evad090

Hejníčková M, Dalíková M, Zrzavá M, Marec F, Lorite P, Montiel EE. (2023) Accumulation of retrotransposons contributes to W chromosome differentiation in the willow beauty Peribatodes rhomboidaria (Lepidoptera: Geometridae). Scientific Reports 13: 534. doi:10.1038/s41598-023-27757-3

Kaniewska M, Chvalová D, Doležel D. (2023) Impact of photoperiod and functional clock on male diapause in cryptochrome and pdf mutants in the linden bug Pyrrhocoris apterus. Journal of Comparative Physiology A. Early View: doi:10.1007/s00359-023-01647-5

Pospíšilová K, Van ’t Hof A, Yoshido A, Kružíková R, Visser S, Zrzavá M, Bobryshava K, Dalíková M, Marec F. (2023) Masculinizer gene controls male sex determination in the codling moth, Cydia pomonella. Insect Biochemistry and Molecular Biology 160: 103991. doi:10.1016/j.ibmb.2023.103991

2022

Tumova S, Milacek M, Snajdr I and Jindra M. Unique peptidic agonists of a juvenile hormone receptor with species-specific effects on insect development and reproduction. PNAS 119 (48) e2215541119.  doi.org/10.1073/pnas.2215541119

Kubásek J, Svobodová K, Půta F, Bruce Krejčí A. Honeybees control the gas permeability of brood and honey cappings. iScience 25(11):105445. doi.org/10.1016/j.isci.2022.105445

Domínguez-Martín MA, Sauer PV, Kirst H, Sutter M, Bína M, Greber BJ, Nogales E, Polívka T, Kerfeld CA. Structures of a phycobilisome in light-harvesting and photoprotected states. Nature 609, 835–845 (2022). doi.org/10.1038/s41586-022-05156-4

Kotwica-Rolinska J, Chodáková L. Smýkal V, Damulewicz M, Provazník J, Wu C, Hejníková M, Chvalová D, Doležel D. (2022) Loss of Timeless Underlies an Evolutionary Transition within the Circadian Clock. Molecular Biology and Evolution 39: msab346. doi:10.1093/molbev/msab346

Kotwica-Rolinska J, Damulewicz M, Chodáková L, Krištofová L, Doležel D. (2022) Pigment dispersing factor is a circadian clock output and regulates photoperiodic response in the linden bug, Pyrrhocoris apterus. Frontiers in Physiology 13: 884909. doi:10.3389/fphys.2022.884909

Maaroufi H, Pauchová L, Lin YH, Wu C, Rouhová L, Kučerová L, Marques Cota Vieira LM, Renner M, Sehadová H, Hradilová M, Žurovec M. (2022) Mutation in Drosophila concentrative nucleoside transporter 1 alters spermatid maturation and mating behavior. Frontiers in Cell and Developmental Biology 10:945572. doi:10.3389/fcell.2022.945572

Rouhová L, Sehadová H, Pauchová L, Hradilová M, Žurovcová M, Šerý M, Rindoš M, Žurovec M. (2022) Using the multi-omics approach to reveal the silk composition in Plectrocnemia conspersa. Frontiers in Molecular Biosciences 9:945239. doi:10.3389/fmolb.2022.945239

Štundlová J, Hospodářská M, Lukšíková K, Volenikova A, Pavlica T, Altmanová M, Richter A, Reichard M, Dalíková M, Pelikánová Š, Marta A, Simanovsky SA, Hiřman M, Jankásek M, Dvořák T, Bohlen J, Ráb P., Englert C, Nguyen P, Sember A. (2022) Sex chromosome differentiation via changes in the Y chromosome repeat landscape in African annual killifishes Nothobranchius furzeri and N. kadleci. Chromosome Research 30: 309-33. doi:10.1007/s10577-022-09707-3

Thakkar N, Giesecke A, Bazalová O, Martinek J, Smýkal V, Stanewsky R., Doležel D. (2022) Evolution of casein kinase 1 and functional analysis of new doubletime mutants in Frontiers in Physiology 13: article number: 1062632. doi:10.3389/fphys.2022.1062632

Voleníková A, Nguyen P, Davey P, Sehadová H, Kludkiewicz B, Koutecky P, Walters JR, Roessingh P, Provazníková I, Šerý M, Žurovcová M, Hradilova M, Rouhová L, Žurovec M. (2022) Genome sequence and silkomics of the spindle ermine moth, Yponomeuta cagnagella, representing the early diverging lineage of the ditrysian Lepidoptera. Communications Biology 5: 1281. doi:10.1038/s42003-022-04240-9

Wu C, Šauman I, Maaroufi H, Žaloudíková A, Žurovcová M, Kludkiewicz B, Hradilova M, Žurovec M. (2022) Characterization of silk genes in Ephestia kuehniella and Galleria mellonella revealed duplication of sericin genes and highly divergent sequences encoding fibroin heavy chains. Frontiers in Molecular Biosciences 9:1023381. doi: 10.3389/fmolb.2022.1023381

Benz C, Muller N, Kaltenbrunner S, Váchová H , Vancová M, Lukeš J, Varga V, Hashimi H. (2022) Kinetoplastid-specific X2-family kinesins interact with a kinesin-like pleckstrin homology domain protein that localizes to the trypanosomal microtubule quartet Molecular Microbiology 118: 155–174. doi: 10.1111/mmi.14958

Gahura O, Chauhan P, Panicucci Zíková A. (2022) Mechanisms and players of mitoribosomal biogenesis revealed in trypanosomatids Trends in Parasitology 38: 1053-1067. doi: 10.1016/j.pt.2022.08.010

Gahura O, Mühleip A, Hierro-Yap C, Panicucci B, Jain M, Hollaus D, Slapničková M., Panicucci Zíková A, Amunts A. (2022) An ancestral interaction module promotes oligomerization in divergent mitochondrial ATP synthases Nature Communications 13:5989. doi:10.1038/s41467-022-33588-z

Hegedüsová E, Maršalová V, Kulkarni S, Paris Z. (2022) Trafficking and/or division: Distinct roles of nucleoporins based on their location within the nuclear pore complex RNA Biology 19: 650–661. doi:10.1080/15476286.2022.2067711

Kaurov I, Heller J, Deisenhammer S, Potěšil D, Zdráhal Z, Hashimi H. (2022) The essential cysteines in the CIPC motif of the thioredoxin-like Trypanosoma brucei MICOS subunit TbMic20 do not form an intramolecular disulfide bridge in vivo Molecular and Biochemical Parasitology 248: 111463. doi:10.1016/j.molbiopara.2022.111463

Selinger M, Věchtová P, Tykalová H, Ošlejšková P, Rumlová M, Štěrba J, Grubhoffer L. (2022) Integrative RNA profiling of TBEV-infected neurons and astrocytes reveals potential pathogenic effectors Computational and Structural Biotechnology Journal 20: 2759-2777. doi:10.1016/j.csbj.2022.05.052

Hofstatter PG, Thangavel G, Lux T, Neumann P, Vondrak T, Novák P, Zhang M, Costa L, Castellani M, Scott A, Toegelová H, Fuchs J, Mata-Sucre Y, Dias Y, Vanzela A, Huettel B, Almeida CCS, Šimková H, Souza G, Pedrosa-Harand A, Macas J, Mayer K, Houben A, Marques A. (2022) Repeat-based holocentromeres influence genome architecture and karyotype evolution Cell 185: 1-16. doi:10.1016/j.cell.2022.06.045

2021

Bora P , Gahurova L, Hauserova A, Stiborova M, Collier R, Potěšil D, Zdráhal Z and Bruce AW. DDX21 is a p38-MAPK sensitive nucleolar protein necessary for mouse preimplantation embryo development and cell-fate specification. Open Biology 7:210092 (2021). doi/10.1098/rsob.210092

Bora P, Gahurova L, Mašek T, Hauserova A, Potěšil D, Jansova D, Susor A, Zdráhal Z, Ajduk A, Pospíšek M and Bruce AW. p38-MAPK-mediated translation regulation during early blastocyst development is required for primitive endoderm differentiation in mice. Commun. Biol. 4:788 (2021). doi.org/10.1038/s42003-021-02290-z

Bajgar A, Krejcova G, Dolezal T. Polarization of Macrophages in Insects: Opening Gates for Immuno-Metabolic Research. Front Cell Dev Biol 9: 629238. (2021) doi/10.3389/fcell.2021.629238.

Sember A, Nguyen P, Perez MF, Altmanová M, Ráb P, Cioffi MB. Multiple sex chromosomes in teleost fishes from a cytogenetic perspective: state of the art and future challenges. Philos Trans R Soc Lond B Biol Sci. (2021) doi/10.1098/rstb.2020.0098

Ávila Herrera IM, Král J, Pastuchová M, Forman M, Musilová J, Kořínková T, Šťáhlavský F, Zrzavá M, Nguyen P, Just P, Haddad C, Hiřman M, Koubová M, Sadílek D, Huber BA. Evolutionary pattern of karyotypes, sex chromosomes, nucleolus organizer regions, and meiosis in pholcid spiders (Araneae: Pholcidae): implications for reconstructing karyotype evolution of araneomorph spiders. BMC Evol Biol. (2021) doi/10.1186/s12862-021-01750-8

 

2020

Virnicchi G, Bora P, Gahurova L, Šušor A and Bruce AW. Wwc2 is a novel cell division regulator during preimplantation mouse embryo lineage formation and oogenesis. Front. Cell. Dev. Biol. 8:857 (2020). doi.org/10.3389/fcell.2020.00857

Del Llano E, Masek T, Gahurova L, Pospisek M, Koncicka M, Jindrova A, Jansova D, Iappan R, Roucova K, Bruce AW, Kubelka M and Susor A. Age-related differences in the translational landscape of mammalian oocytes. Aging Cell e13231 (2020). doi.org/10.1111/acel.13231

Yoshido A, Šíchová J, Pospíšilová K, Nguyen P, Voleníková A, Šafář J, Provazník J, Vila R, Marec F. Evolution of multiple sex chromosomes associated with dynamic genome reshuffling in Leptidea wood white butterflies. Heredity 125: 138–154. (2020) doi.org/10.1038/s41437-020-0325-9

2019

Bora P, Thamodaran V, Šušor A and Bruce AW. p38-mitogen activated kinases mediate a developmental regulatory response to amino acid depletion and associated oxidative stress in mouse blastocyst embryos. Front. Cell. Dev. Biol. 7:276 (2019). doi.org/10.3389/fcell.2019.00276

Krejcova G, Danielova A, Nedbalova P, Kazek M, Strych L, Chawla G, Tennessen JM, Lieskovská J, Jindra M, Dolezal T, Bajgar A. Drosophila macrophages switch to aerobic glycolysis to mount effective antibacterial defense. eLife 14;8. pii: e50414. (2019) doi/10.7554/eLife.50414.

Dolezal T, Krejcova G, Bajgar A, Nedbalova P, Strasser P. Molecular regulations of metabolism during immune response in insects. Insect Biochem Mol Biol 109:31-42. (2019). doi/10.1016/j.ibmb.2019.04.005

Bajgar, A., Salon, I., Krejcova, G., et al. Yeast glucan particles enable intracellular protein delivery in Drosophila without compromising the immune system. Biomaterial Sci. 7 (11) 4708-4719. (2019) doi.org/10.1039/C9BM00539K

Morgantini, C.,..., Krejcova, G, Bajgar, A, Aouadi, M.  Liver macrophages regulate systemic metabolism through non- inflammatory factors. Nat. Metab. 1 (4): 445-459 (2019) doi/10.1038/s42255-019-0044-9

Meccariello A., Salvemini M., Primo P., Hall B., Koskinioti P., Dalíková M., et al. Maleness-on-the-Y (MoY) orchestrates male sex determination in major agricultural fruit fly pests. Science 27 : eaax1318. (2019) doi/10.1126/science.aax1318

Carabajal Paladino LZ, Hladová I, Berger M, Bass C, Aratchige NS, López SN, Marec F, Nguyen P. Sex chromosome turnover in moths of the diverse superfamily Gelechioidea. Genome Biol Evol 11:1307–1319. (2019) doi/10.1093/gbe/evz075

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Publikace

Katedra experimentální biologie rostlin

2024

Hájek, T., & Urbanová, Z. (2024). Enzyme adaptation in Sphagnum peatlands questions the significance of dissolved organic matter in enzyme inhibition. Science of The Total Environment, 911, 168685. https://doi.org/10.1016/j.scitotenv.2023.168685

Svobodová, K., Krištůfek, V., Kubásek, J., & Bruce Krejčí, A. (2024). Alcohol extract of the gypsy mushroom (Cortinarius caperatus) inhibits the development of Deformed wing virus infection in western honey bee (Apis mellifera). Journal of Insect Physiology, 152, 104583. https://doi.org/10.1016/J.JINSPHYS.2023.104583

Weides, S. E., Hájek, T., Liancourt, P., Herberich, M. M., Kramp, R. E., Tomiolo, S., Pacheco‐Riaño, L. C., Tielbörger, K., & Májeková, M. (2024). Belowground niche partitioning is maintained under extreme drought. Ecology, 105(1), e4198. https://doi.org/10.1002/ecy.4198

2023

Kubásek, J., Kalistová, T., Janová, J., Askanbayeva, B., Bednář, J., & Šantrůček, J. (2023). 13 CO2 labelling as a tool for elucidating the mechanism of cuticle development: a case of Clusia rosea. The New Phytologist, 238(1), 202–215. https://doi.org/10.1111/nph.18716

Kalistová, T., & Janda, M. (2023). Could a cuticle be an active component of plant immunity? Biologia plantarum, 67, 322-333. https://doi.org/10.32615/bp.2023.037

Janda, M., Rybak, K., Krassini, L., Meng, C., Feitosa-Junior, O., Stigliano, E., Szulc, B., Sklenar, J., Menke, F. L. H., Malone, J. G., Brachmann, A., Klingl, A., Ludwig, C., & Robatzek, S. (2023). Biophysical and proteomic analyses of Pseudomonas syringae pv. tomato DC3000 extracellular vesicles suggest adaptive functions during plant infection. mBio, 14(4), e0358922. https://doi.org/10.1128/mbio.03589-22

Awasthi, P., Mishra, A. K., Kocábek, T., Nath, V. S., Mishra, S., Hazzouri, K. M., Sudalaimuthuasari, N., Stajner, N., Jakše, J., Krofta, K., Hájek, T., & Amiri, K. M. A. (2023). CRISPR/Cas9-mediated mutagenesis of the mediator complex subunits MED5a and MED5b genes impaired secondary metabolite accumulation in hop (Humulus lupulus). Plant Physiology and Biochemistry, 201, 107851. https://doi.org/10.1016/j.plaphy.2023.107851

Visez, N., Hamzé, M., Vandenbossche, K., Occelli, F., de Nadaï, P., Tobon, Y., Hájek, T., & Choël, M. (2023). Uptake of ozone by allergenic pollen grains. Environmental Pollution, 331, 121793. https://doi.org/10.1016/j.envpol.2023.121793

Krejčová, G., Morgantini, C., Zemanová, H., Lauschke, V. M., Kovářová, J., Kubásek, J., Nedbalová, P., Kamps-Hughes, N., Moos, M., Aouadi, M., Doležal, T., & Bajgar, A. (2023). Macrophage-derived insulin antagonist ImpL2 induces lipoprotein mobilization upon bacterial infection. The EMBO Journal, e114086. https://doi.org/10.15252/EMBJ.2023114086

Vondrák, J., Svoboda, S., Zíbarová, L., Štenclová, L., Mareš, J., Pouska, V., Košnar, J., & Kubásek, J. (2023). Alcobiosis, an algal-fungal association on the threshold of lichenisation. Scientific Reports 2023 13:1, 13(1), 1–13. https://doi.org/10.1038/s41598-023-29384-4

2022

Kubásek, J., Hájek, T., Duckett, J., Pressel, S., & Šantrůček, J. (2022). Moss stomata do not respond to light and CO2 concentration but facilitate carbon uptake by sporophytes: A gas exchange, stomatal aperture and 13C labelling study. New Phytologist, 230, 1815-1828. https://doi.org/10.1111/nph.17208

Šantrůček, J. (2022). The why and how of sunken stomata: does the behaviour of encrypted stomata and the leaf cuticle matter? Annals of Botany, 130, 285-300. https://doi.org/10.1093/aob/mcac055

Janda, M., & Robatzek, S. (2022). Extracellular vesicles from phytobacteria: Properties, functions and uses. Biotechnology advances, 58, 107934. https://doi.org/10.1016/j.biotechadv.2022.107934

Barrio, I. C., Ehrich, D., Soininen, E. M., Ravolainen, V. T., Bueno, C. G., Gilg, O., Koltz, A. M., Speed, J. D. M., Hik, D. S., Mörsdorf, M., Alatalo, J. M., Angerbjörn, A., Bêty, J., Bollache, L., Boulanger-Lapointe, N., Brown, G. S., Eischeid, I., Giroux, M. A., Hájek, T., et al. (2022). Developing common protocols to measure tundra herbivory across spatial scales. Arctic Science, 8(3), 638-679. https://doi.org/10.1139/as-2020-0020

Kosová, V., Hájek, T., Hadincová, V., & Münzbergová, Z. (2022). The importance of ecophysiological traits in response of Festuca rubra to changing climate. Physiologia Plantarum, 174(1), e13608. https://doi.org/10.1111/ppl.13608

Kubásek, J., Svobodová, K., Půta, F., & Krejčí, A. B. (2022). Honeybees control the gas permeability of brood and honey cappings. iScience, 25(11), 105445. https://doi.org/10.1016/J.ISCI.2022.105445

2021

Kubásek, J., Hájek, T., Duckett, J., Pressel, S., & Šantrůček, J. (2021). Moss stomata do not respond to light and CO2 concentration but facilitate carbon uptake by sporophytes: a gas exchange, stomatal aperture and 13C labelling study. New Phytologist, 230(5), 1815-1828. https://doi.org/10.1111/nph.17208

Lubbe, F. C., Bitomský, M., Hájek, T., de Bello, F., Doležal, J., Jandová, V., Janeček, Š., Bartušková, A., Lanta, V., & Klimešová, J. (2021). A tale of two grasslands: how belowground storage organs coordinate their traits with water-use traits. Plant and Soil, 465(1-2), 533-548. https://doi.org/10.1007/s11104-021-05031-7

Jílková, V., Devetter, M., Bryndová, M., Hájek, T., Kotas, P., Luláková, P., Meador, T., Navrátilová, D., Saccone, P., & Macek, P. (2021). Carbon Sequestration Related to Soil Physical and Chemical Properties in the High Arctic. Global Biogeochemical Cycles, 35(9), e2020GB006877. https://doi.org/10.1029/2020GB006877

Martínková, J., Hájek, T., Adamec, L., & Klimešová, J. (2021). Growth, root respiration and photosynthesis of a root-sprouting short-lived herb after severe biomass removal. Flora, 284, 151915. https://doi.org/10.1016/j.flora.2021.151915

Urbanová, Z., & Hájek, T. (2021). Revisiting the concept of ‘enzymic latch’ on carbon in peatlands. Science of The Total Environment, 779, 146384. https://doi.org/10.1016/j.scitotenv.2021.146384

Angst, G., Pokorný, J., Mueller, C. W., Prater, I., Preusser, S., Kandeler, E., Meador, T., Straková, P., Hájek, T., van Buiten, G., & Angst, Š. (2021). Soil texture affects the coupling of litter decomposition and soil organic matter formation. Soil Biology and Biochemistry, 159, 108302. https://doi.org/10.1016/j.soilbio.2021.108302

Májeková, M., Hájek, T., Albert, Á. J., de Bello, F., Doležal, J., Götzenberger, L., Janeček, Š., Lepš, J., Liancourt, P., & Mudrák, O. (2021). Weak coordination between leaf drought tolerance and proxy traits in herbaceous plants. Functional Ecology, 35(6), 1299-1311. https://doi.org/10.1111/1365-2435.13792

Vráblová, M., Marková, D., Vrábl, D., Koutník, I., Sokolová, B., & Hronková, M. (2021). Surface plasmon resonance: An innovative method for studying water permeability of plant cuticles. Plant Science, 310. https://doi.org/10.1016/j.plantsci.2021.110978

Voon, C. P., Law, Y.-S., Guan, X., Lim, S.-L., Xu, Z., Chu, W.-T., Zhang, R., Sun, F., Labs, M., Leister, D., Pribil, M., Hronková, M., Kubásek, J., Cui, Y., Jiang, L., Tsuyama, M., Gardeström, P., Tikkanen, M., & Lim, B. L. (2021). Modulating the activities of chloroplasts and mitochondria promotes adenosine triphosphate production and plant growth. Quantitative Plant Biology, 2. https://doi.org/10.1017/qpb.2021.7

2020

Hájek, T. (2020). Interlinking moss functional traits. A commentary on: ‘Mechanisms behind species-specific water economy responses to water level drawdown in peat mosses’. Annals of Botany, 126(2), iv-v. https://doi.org/10.1093/aob/mcaa108

Vicherová, E., Glinwood, R., Hájek, T., Šmilauer, P., & Ninkovic, V. (2020). Bryophytes can recognize their neighbours through volatile organic compounds. Scientific Reports, 10(1), 7405. https://doi.org/10.1038/s41598-020-64108-y

Tveit, A. T., Kiss, A., Winkel, M., Horn, F., Hájek, T., Svenning, M. M., Wagner, D., & Liebner, S. (2020). Environmental patterns of brown moss- and Sphagnum-associated microbial communities. Scientific Reports, 10(1), 22412. https://doi.org/10.1038/s41598-020-79773-2

Liancourt, P., Song, X., Macek, M., Santrucek, J., & Dolezal, J. (2020). Plant's-eye view of temperature governs elevational distributions. Global Change Biology, 26, 4094-4103. https://doi.org/10.1111/gcb.15129

Canarini, A., Wanek, W., Watzka, M., Sandén, T., Spiegel, H., Šantrůček, J., & Schnecker, J. (2020). Quantifying microbial growth and carbon use efficiency in dry soil environments via 18O water vapor equilibration. Global Change Biology, 26, 5333-5341.  https://doi.org/10.1111/gcb.15168

Hůnová, I., Hanusková, D., Jandová, K., Tesař, M., Květoň, J., Kukla, J. (2020). Estimates of the contribution of fog water to wet atmospheric deposition in Czech mountain forests based on its stable hydrogen and oxygen isotope composition: Preliminary results. European journal of environmental sciences, 10(2,) 89-97. https://doi.org/10.14712/23361964.2020.10

Šolcová, A., Jamrichová, E., Horsák, M., Pařil, P., Petr, L., Heiri, O., Květoň, J., Křížek, M., Hartvich, F., Hájek, M., Hájková, P. (2020). Abrupt vegetation and environmental change since the MIS 2: A unique paleorecord from Slovakia (Central Europe). Quaternary Science Reviews, 230, 106170. https://doi.org/10.1016/j.quascirev.2020.106170

Vráblová, M., Hronková, M., Vrábl, D., Kubásek, J., & Šantrůček, J. (2018). Light intensity-regulated stomatal development in three generations of Lepidium sativum. Environmental and Experimental Botany, 156. https://doi.org/10.1016/j.envexpbot.2018.09.012

Vráblová, M., Vrábl, D., Sokolová, B., Marková, D., & Hronková, M. (2020). A modified method for enzymatic isolation of and subsequent wax extraction from Arabidopsis thaliana leaf cuticle. Plant Methods, 16(1). https://doi.org/10.1186/s13007-020-00673-7

2019

Šantrůček, J., Schreiber, L., Macková, J., Vráblová, M., Květoň, J., Macek, P., & Neuwirthová, J. (2019). Partitioning of mesophyll conductance for CO2 into intercellular and cellular components using carbon isotope composition of cuticles from opposite leaf sides. Photosynthesis Research, 141, 33-51. https://doi.org/10.1007/s11120-019-00628-7

Májeková, M., Martínková, J., Hájek, T., & Niu, S. (2019). Grassland plants show no relationship between leaf drought tolerance and soil moisture affinity, but rapidly adjust to changes in soil moisture. Functional Ecology, 33(5), 774-785. https://doi.org/10.1111/1365-2435.13312

Vondrak, J., Urbanavichus, G., Palice, Z., Malicek, J., Urbanavichene, I., Kubásek, J., & Ellis, C. (2019). The epiphytic lichen biota of Caucasian virgin forests: a comparator for European conservation. Biodiversity and Conservation, 28(12), 3257–3276. https://doi.org/10.1007/s10531-019-01818-4

Vondrak, J., Frolov, I., Davydov, E. A., Yakovchenko, L., Malicek, J., Svoboda, S., & Kubásek, J. (2019). The lichen family Teloschistaceae in the Altai-Sayan region (Central Asia). Phytotaxa, 396(1), 1-+. https://doi.org/10.11646/phytotaxa.396.1.1

2018

Plavcová, L., Hronková, M., Šimková, M., Květoň, J., Vráblová, M., Kubásek, J., & Šantrůček, J. (2018) Seasonal variation of d18O and d2H in leaf water of Fagus sylvatica L. and related water compartments. Journal of Plant Physiology, 227, 56-65. https://doi.org/10.1016/j.jplph 2018.03.009

Vráblová, M., Hronková, M., Vrábl, D., Kubásek, J., & Šantrůček, J. (2018). Light intensity-regulated stomatal development in three generations of Lepidium sativum. Environmental and Experimental Botany, 156: 316-324, 2018. https://doi.org/10.1016/j.envexpbot.2018.09.012

Světlíková, P., Hájek, T., & Těšitel, J. (2018). Water-stress physiology of Rhinanthus alectorolophus, a root-hemiparasitic plant. PLOS ONE, 13(8), e0200927. https://doi.org/10.1371/journal.pone.0200927

Světlíková, P., Hájek, T., & Těšitel, J. (2018). A hemiparasite in the forest understorey: photosynthetic performance and carbon balance of Melampyrum pratense. Plant Biology, 20(1), 50-58. https://doi.org/10.1111/plb.12638

Bengtsson, F., Rydin, H., & Hájek, T. (2018). Biochemical determinants of litter quality in 15 species of Sphagnum. Plant and Soil, 425(1-2), 161-176. https://doi.org/10.1007/s11104-018-3579-8

Bjorkman, A. D., Myers‐Smith, I. H., Elmendorf, S. C., Normand, S., Thomas, H. J. D., …Hájek, T. et al. (2018). Tundra Trait Team: A database of plant traits spanning the tundra biome. Global Ecology and Biogeography, 27(12), 1402-1411. https://doi.org/10.1111/geb.12821

Juřicková, L., Pokorný, P., Hošek, J., Horáčková, J., Květoň, J., Zahajská, P., Jansová, A., Ložek, V. (2018). Early postglacial recolonisation, refugial dynamics and the origin of a major biodiversity hotspot. A case study from the Mala Fatra mountains, Western Carpathians, Slovakia. Holocene, 28(4), 583-594. https://doi.org/10.1177/0959683617735592

2017

Stolárik, T., Hedtke, B., Šantrůček, J., Ilík, P., Grimm, B., & Pavlovič, A. (2017). Transcriptional and post-transcriptional control of chlorophyll biosynthesis by dark-operative protochlorophyllide oxidoreductase in Norway spruce. Photosynthesis Research, 132, 165-179. https://doi.org/10.1007/s11120-017-0354-2

Vráblová, M., Vrábl, D., Hronková, M., Kubásek, J., & Šantrůček, J. (2017). Stomatal function, density and pattern, and CO2 assimilation in Arabidopsis thaliana tmm1 and sdd1-1 mutants. Plant Biology, 19, 689-701. https://doi.org/10.1111/plb.12577

Korrensalo, A., Alekseychik, P., Hájek, T., Rinne, J., Vesala, T., Mehtätalo, L., Mammarella, I., & Tuittila, E. -S. (2017). Species-specific temporal variation in photosynthesis as a moderator of peatland carbon sequestration. Biogeosciences, 14(2), 257-269. https://doi.org/10.5194/bg-14-257-2017

Vicherová, E., Hájek, M., Šmilauer, P., & Hájek, T. (2017). Sphagnum establishment in alkaline fens: Importance of weather and water chemistry. Science of The Total Environment, 580, 1429-1438. https://doi.org/10.1016/j.scitotenv.2016.12.109

2016

Šantrůčková, H., Kubešová, J., Šantrůček, J., Kaštovská, E., & Rejmánková, E. (2016). The effect of P enrichment on exudate quantity and bioavailability - a comparison of two macrophyte species. Wetlands, 36, 789-798. https://doi.org/10.1093/jxb/erv233

Čada, V., Šantrůčková, H., Šantrůček, J., Kubištová, L., Seedre, M., & Svoboda, M. (2016). Complex physiological response of Norway spruce to atmospheric pollution – decreased carbon isotope discrimination and unchanged tree biomass increment. Frontiers in Plant Science, 7(805). https://doi.org/10.3389/fpls.2016.00805

Risi, C., Ogée, J., Bony, S., Bariac, T., Raz-Yaseef, N., Wingate, L., Welker, J., Knohl, A., Kurz-Besson, C., Leclerc, M., Zhang, G., Buchmann, N., Santrucek, J., Hronkova, M., David, T., Peylin, P., & Guglielmo, F. (2016). The Water Isotopic Version of the Land-Surface Model ORCHIDEE: Implementation, Evaluation, Sensitivity to Hydrological Parameters. Hydrology Current Research 7, 1-11. https://doi.org/10.4172/2157-7587.1000258

Skalák, J., Cerný, M., Jedelský, P., Dobrá, J., Ge, E., Novák, J., Hronková, M., Dobrev, P., Vanková, R., & Brzobohatý, B. (2016). Stimulation of ipt overexpression as a tool to elucidate the role of cytokinins in high temperature responses of Arabidopsis thaliana. Journal of Experimental Botany, 67(9). https://doi.org/10.1093/jxb/erw129

Pichrtová, M., Arc, E., Stöggl, W., Kranner, I., Hájek, T., Hackl, H., Holzinger, A., & Elster, J. (2016). Formation of lipid bodies and changes in fatty acid composition upon pre-akinete formation in Arctic and Antarctic Zygnema (Zygnematophyceae, Streptophyta) strains. FEMS Microbiology Ecology, 92(7), fiw096. https://doi.org/10.1093/femsec/fiw096

Pichrtová, M., Hájek, T., & Elster, J. (2016). Annual development of mat-forming conjugating green algae Zygnema spp. in hydro-terrestrial habitats in the Arctic. Polar Biology, 39(9), 1653-1662. https://doi.org/10.1007/s00300-016-1889-y

Plesková, Z., Jiroušek, M., Peterka, T., Hájek, T., Dítě, D., Hájková, P., Navrátilová, J., Šímová, A., Syrovátka, V., Hájek, M., & Wildi, O. (2016). Testing inter‐regional variation in pH niches of fen mosses. Journal of Vegetation Science, 27(2), 352-364. https://doi.org/10.1111/jvs.12348

Korrensalo, A., Hájek, T., Vesala, T., Mehtätalo, L., & Tuittila, E. -S. (2016). Variation in photosynthetic properties among bog plants. Botany, 94(12), 1127-1139. https://doi.org/10.1139/cjb-2016-0117

Kubásek, J. (2016). Optical Spectroscopy for Analysis of the Ratio of Stable Isotopes. Competition or Alternative for Conventional Mass Spectroscopy of Stable Isotopes (IRMS)? Chemické listy, 110(3), 166–173.

2015

Hronková, M., Wiesnerová, D., Šimková, M., Skůpa, P., Dewitte, W., Vráblová, M., Zažímalová, E., & Šantrůček, J. (2015). Light induced STOMAGEN-mediated stomatal development in Arabidopsis leaves. Journal of Experimental Botany, 66, 4621-4630. https://doi.org/10.1093/jxb/erv233

Světlíková, P., Hájek, T., & Těšitel, J. (2015). Hydathode trichomes actively secreting water from leaves play a key role in the physiology and evolution of root-parasitic rhinanthoid Orobanchaceae. Annals of Botany, 116(1), 61-68. https://doi.org/10.1093/aob/mcv065

Vicherová, E., Hájek, M., & Hájek, T. (2015). Calcium intolerance of fen mosses: Physiological evidence, effects of nutrient availability and successional drivers. Perspectives in Plant Ecology, Evolution and Systematics, 17(5), 347-359. https://doi.org/10.1016/j.ppees.2015.06.005

Hájek, M., Jiroušek, M., Navrátilová, J., Horodyská, E., Peterka, T., Plesková, Z., Navrátil, J., Hájková, P., & Hájek, T. (2015). Changes in the moss layer of Czech fens indicate early succession triggered by nutrient enrichment. Preslia, 87(2), 279-301.

Mikulášková, E., Hájek, M., Veleba, A., Johnson, M. G., Hájek, T., & Shaw, J. A. (2015). Local adaptations in bryophytes revisited: the genetic structure of the calcium‐tolerant peatmoss Sphagnum warnstorfii along geographic and pH gradients. Ecology and Evolution, 5(1), 229-242. https://doi.org/10.1002/ece3.1351

Tazoe, Y., Santrucek, J. (2015). Superimposed behavior of gm under ABA-induced stomata closing and low CO2. Plant, Cell and Environment, 38, 385-387. https://doi.org/10.1111/pce.12437

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