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PRF

Financial support

Information for PhD students

  • Scholarship

    All students of doctoral study programmes in the standard full-time period are entitled to a scholarship. It starts at 10,000 CZK/month and then increases depending on publications or presentations at conferences up to 12,500 CZK/month.

    For details read Provision of the Dean D 58 – On the Amount of Scholarship of PhD Students

    Students who have fulfilled the regular study duties and other conditions as detailed in D 58 may, at the proposal of the supervisor, receive a higher basic scholarship. The form Request for the increase of regular scholarship is to be sent to the Department of Study affairs, and the decision whether to comply is made by the Vice-Dean for doctoral studies.

    The Dean may individually reduce the Doctoral scholarship by up to 50 % for students in the thirteenth and subsequent months of study who have not yet fulfilled the obligations set out in paragraph 1 of provision D 58 or for whom the Specialist Board has reduced the scholarship based on non-fulfilment of other study obligations. The reduction is effective from the following calendar month to the calendar month in which the Dean, on the proposal of the Specialist Board, again determines the amount of the scholarship according to paragraphs 1 to 4 of D 58. In the event that the conclusion of the regular evaluation of Doctoral studies by the Specialist Board is a statement that the student has not fulfilled the obligations according to the individual study plan (evaluation C), the Dean may decide to withdraw the scholarship.

  • Travels abroad

    Internships abroad

    Students of doctoral study programmes are obliged to complete the course Study stay during their studies, the minimum length of the study stay is 1 month. The goal is to obtain theoretical as well as practical knowledge and experience, experimental work to obtain specific data, their evaluation and preparation of scientific publication.

    Course code and its duration:
    FPR/ 801 – Study stay I.–  stay abroad for 2 to 4 weeks [IS/STAG link]
    FPR/ 802 – Study stay II. – stay abroad for 1 to 3 months [IS/STAG link]
    FPR/ 803 – Study stay III. – stay abroad for more than 2 months [IS/STAG link]

    Before leaving for their study stay, the student must register their stay by submitting filled form Student’s international mobility to the Vice-Dean for doctoral studies at This email address is being protected from spambots. You need JavaScript enabled to view it.. Students going through Erasmus+ programme do not need to submit this form, their internship is administered and registered by Mgr. Barbara Okosy.
    Credit for course completion is awarded by the Vice-Dean for doctoral studies upon submission of a Confirmation of an internship form issued by the visited institution. All students returning from an internship, including returning from Erasmus+ stay, must submit this confirmation.

    Student’s international mobility form
    Confirmation of an internship

    Financial support of internships abroad

    Students can apply for financial support for an internship abroad from several sources:

    • GA JU – contact the principal investigator of the team grant of which you are a member
    • Departmental RVO – contact the head of your department
    • International mobility 2024/2025 project – contact the Vice-Dean for doctoral studies, details about the applications are listed below
    • Supervisor’s project

    Other options for financial support outside university sources:

    • Erasmus+ - information about the project can be found here, the administrator at our faculty is Mgr. Barbora Okosy
    • Fulbright scholarships – for stays at the USA, more information here
    • IBERA AV ČR
    • Of the extraordinary funding opportunities are students informed via email

    If you wish to apply for support from the International mobility 2024/2025 project, please submit your motivation letter to the Vice-Dean for doctoral studies doc. RNDr. Eva Nováková, Ph.D., at This email address is being protected from spambots. You need JavaScript enabled to view it. or This email address is being protected from spambots. You need JavaScript enabled to view it.. In your application, please include:

    • Full name
    • Year of study
    • Study programme + subject of your dissertation thesis
    • Length of the stay abroad (if you have a more precise idea about possible dates of your stay, please specify them
    • Clearly defined goals
    • Financial budget (cost of flights/tickets, accomodation, what other financial sources are you requesting/have support from)

    All the circumstances – length and location of the internship, support from other sources, the total amount of funding available – are taken into account in awarding and determining the amount of financial support from the university project. If the location or length of the internship eventually change (the internship is shorter or in a more financially available country), the financial contribution will be reduced proportionaly.

    Student can apply for the support from the university project once per year, and the project supports expenses for a maximum of 3 months. Priority is given to students who have not yet completed the minimum required duration of a study stay (1 month).

    Financial support of conferences abroad

    Sources of financial support of internships can be used as well for support of international conferences, with departments having resources reserved especially for them.

    Students are required to present their results at least once during the standard time of study at an international conference, where the language of the meeting is English or, with the approval of the Specialist Board, another world language. The conference is to be registered in IS/STAG as a course under the code:

    XXX/907 – Conference Presentation (in foreign language) – xxx = departmental code
    The credit for fulfilment is awarded by the Chair of the SB after the student submits a copy of the poster or copies from the collection of abstracts.

  • Grants

    For more detailed information about grants available at the Faculty of Science, read the section Research

    GA JU/ GA USB

    The Grant Agency of the University of South Bohemia (Grantová agentura Jihočeské univerzity) aims to support quality research of students of doctoral and master’s degree programmes at USB. GA JU supports students in two ways:

    1. as members of the team projects (managed by a JU employee, but at least half of the team members must be students). The projects last for three years and there may be a turnover of students during the project duration. The project enables the team members to draw funds for research activities, including travel expenses and regular and extraordinary scholarships. Each included student must be within the standard period of study plus one year.
    2. as a principal investigator of individual projects (submitted by students), which are usually focused on research activities carried out by students of the doctoral study program in full-time study (and during the standard study time). The duration of an individual project is 1 or 2 years.

    More information about GA JU can be found here.

    The assignment of doctoral students to the research teams is solved dynamically throughout the project duration, according to the termination of the students‘ involvement and the admission of new students and their involvement in scientific activities. The aim is that every active full-time doctoral student in standard period should be involved in the activities of just one team project.

    After enrolment, students are assigned to a GA JU team project from which they receive a stipend for their work on the team project.

    Team projects

    Project code

    DSP

    Principal investigator

    017/2022/P

    Ecosystem biology + Limnology

    RNDr. Karolína Tahovská, Ph.D.

    014/2022/P

    Zoology

    prof. Mgr. Radim Šumbera, Ph.D.

    046/2022/P

    Biophysics + Biochemistry + Applied physics

    prof. Mgr. Ivana Kutá Smatanová, Ph.D.

    043/2022/P

    Parasitology + Molecular and cell biology

    prof. RNDr. Václav Hypša, CSc.

    100/2022/P

    Entomology

    prof. RNDr. Oldřich Nedvěd, CSc.

    034/2022/P

    Botany + Plant physiology

    RNDr. Libor Ekrt, Ph.D.

    024/2022/P

    KMB + Genetics

    Mgr. Adam Bajgar, Ph.D.

    061/2022/P

    Infection biology

    doc. RNDr. Jindřich Chmelař, Ph.D.

Read more …Financial support

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D123 - on specifying the conditions for the study of citizens from sanctioned countries

Provision of the Dean D 123
on specifying the conditions for the study of citizens from sanctioned countries

on 1. August 2023

Studies at the Faculty of Science are generally governed by Act No. 111/1998 Coll., This Measure specifies the conditions of study for citizens of countries against which national or international sanctions involving technical assistance and intangible technology transfer are applied. According to the European Commission Opinion C(2019/5883) of 5 August 2019, technical assistance includes the provision of education.

Article 1. List of countries whose nationals are covered by this Measure

The list of sanctioned countries is set out in Annex 1 to this Measure. This list shall be drawn up and updated on the basis of the provisions currently in force and shall be reviewed at least once a year.

Article 2. Enrolment of individual subjects

A student who is a national of a country listed in Annex 1 to this Measure may be de-enrolled in a course identified as at-risk or prevented from enrolling in such a course. In the event of cancellation of enrolment in a course, the student will be notified in writing by a message sent to the school email.

Article 3. Theses assignment

A student who is a national of a country listed in Annex 1 to this Measure may only be assigned a qualifying thesis that is purely basic research and will be published in full immediately after submission for defence. Publication shall be arranged by the study department, unless the student himself/herself has set it when submitting the thesis. The student, the thesis supervisor and any external partner must sign an informed consent to the immediate full publication of the work after submission for defence before the submission of the thesis or dissertation, i.e. the submission of the assignment protocol. In the case of dissertations, the informed consent is signed during the admission procedure and forms part of the documentation for the decision on the outcome of the procedure. The informed consent form is attached as Annex 2 to this Measure.

Article 4. Collaboration on research projects

A student who is a national of a country listed in Annex 1 to this measure may not be part of a research team conducting applied research or basic research for which rapid commercialisation can reasonably be expected.

Article 5. Closing remarks

  1. This measure shall enter into force on the date of its issue.
  2. Theses commissioned before this measure is issued is not affected, but supervisors are requested to apply the measure as far as possible.

 

In České Budějovice, on 1. August 2023

prof. RNDr. František Vácha, Ph.D.
dean PřF JU

Read more …D123 - on specifying the conditions for the study of citizens from sanctioned countries

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Lenka Gahurová

Mgr. Lenka Gahurová, Ph.D. (née Veselovská)

head of the Developmental Epigenetics and Bioinformatics Laboratory

Faculty of Science, University of South Bohemia
Branišovská 31, 37005 České Budějovice
building B, ground floor, door 181
 
Email: This email address is being protected from spambots. You need JavaScript enabled to view it.
Tel. +420 389 032 275


Mgr. Lenka Gahurová, Ph.D. (née Veselovská)

Current possition

Assistant professor and group leader since 2023

Developmental Epigenetics and Bioinformatics Laboratory, Department of Molecular Biology and Genetics, Faculty of Science, University of South Bohemia, Ceske Budejovice, Czech Republic

Previous possitions

postdoctoral research fellow 5/2015 – 12/2022

 Laboratory of Early Mammalian Development, Department of Molecular Biology and Genetics, Faculty of Science, University of South Bohemia, Ceske Budejovice, Czech Republic

research scientist and bioinformatician (part-time) 2/2017 – 12/2022

Laboratory of Biochemistry and Molecular Biology of Germ Cells, Institute of Animal Physiology and Genetics CAS, v.v.i, Libechov, Czech Republic

bioinformatician (part-time) 10/2020 – 12/2022

Laboratory of Chemical Biology of Nucleic Acids, Institute of Organic Chemistry and Biochemistry CA, v.v.i, Prague, Czech Republic

Education

Ph.D. in Developmental Epigenetics 2011 - 2015

Epigenetics Programme, Babraham Institute, University of Cambridge, Cambridge, United Kingdom, supervisor: Dr. Gavin Kelsey

MSc. in Genetics 2009 – 2011

Molecular Biology and Virology, Faculty of Science, Charles University, Prague, Czech Republic, supervisor: Prof. Ilona Hromadníková

visiting MSc. student of Genetics Part II Programme 2009 – 2010

Department of Genetics, Cambridge University, Cambridge, United Kingdom including 11 months research project at Cambridge Institute for Medical Research, Cambridge University, Cambridge, United Kingdom, supervisor Dr. Lucy Raymond

BSc. in Biology 2006-2009

Faculty of Science, Charles University, Prague, Czech Republic

Competitive fellowships and scholarships awarded

TUBITAK 12/2022

The scientific and technological research council of Turkiye) short-term visiting fellowship (travel and personal costs associated with academic visit)

Pamětný grant Martiny Roeselové 11/2021

1 of 4 awards for excellent young scientists with children under age of 6

Marie Sklodowska-Curie Actions Individual Fellowship 6/2017-7/2021

24 months (suspended for total 26 months for 2 maternity leaves)

University of South Bohemia postdoctoral fellowship 2006-2009

1 award per year in Natural Sciences (salary only)

Keystone Symposia The Future of Science Fund Scholarship 1/2014

1 of 4 awards selected from abstracts, for participation at the Keystone Symposium on Epigenetic Programming and Inheritance, Boston, US

Babraham Institute and University of Cambridge European Ph.D. scholarship 10/2011-9/2014

1 of 3 awards, full university fees and living costs for 36 months

Read more …Lenka Gahurová

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Developmental Epigenetics and Bioinformatics Laboratory

Developmental Epigenetics and Bioinformatics Laboratory

The laboratory was founded in 2023. We study unconventional mammalian model species to understand evolutionary history and molecular (especially epigenetic) mechanisms of long-term female fertility at the levels of oocytes, their ovarian niche, and successful embryonic development.

Lab members

  • Lenka Gahurová

    head of the laboratory

  • Eva Kopecká

    technical assistant, researcher

  • Nikolas Tolar

    Ph.D. candidate

  • Alyssa Malapit Fontanilla

    Ph.D. candidate

  • Eliška Bláhová

    MSc. student

  • Jakub Kořenář

    MSc. student

  • Michaela Kazíková

    BSc. student

  • Pavlína Chudá

    BSc. student

  • Lenka Ošmerová

    BSc. student

  • Anja Drobnjak

    BSc. student

  • Vilja Langer

    BSc. student

  • Laura Andessner-Angleitner

    BSc. student

Research

Mammalian oocytes (=female eggs) are established during female embryonic development as a finite pool. They are essential for propagation of the species yet are among the oldest cells in the body – they can be several decades old in long-lived species such as humans. They preserve their quality for extraordinarily long time compared to most other cell types in the body, nevertheless, female fertility is one of the first physiological functions undergoing age-associated decline. This decline is generally associated with decreased quantity and quality of oocytes, affecting the ability to sustain successful embryonic development.
Studies on female fertility and oocyte biology are mostly performed on mouse, a classical mammalian model. However, mice are fertile only for <12 months, and cannot therefore fully recapitulate biological processes in long-lived species that are fertile for several decades. Moreover, increasing number of studies show that mechanism uncovered in mouse do not universally apply across mammals.

 

What we ask:
(1) What are the molecular mechanisms conferring long-term oocyte quality and what can go wrong? How is oocyte quality and quantity affected by their ovarian niche and physiological processing taking place in the ovary (such as ovulations)?
(2) How does the dynamic relationship between host and transposons affect oocyte biology, maternal to zygotic transition, and embryonic development, and does it change during maternal aging?


What we do:
We employ various sequencing (genomics, transcriptomics, epigenomics) and imaging approaches to study oocytes, ovaries and embryos of multiple short-lived and long-lived rodent species from different phylogenetic groups – especially naked mole-rat, giant mole-rat, guinea pig, coruro, blind mole rat and mouse.

Read more …Developmental Epigenetics and Bioinformatics Laboratory

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CV Fencková

Mgr. Michaela Fencková, Ph.D.

head of the Laboratory of Neurogenetics

Faculty of Science, University of South Bohemia
Branišovská 31, 37005 České Budějovice
building B, ground floor, door number 194b
 
Email: fenckm00@prf.jcu.cz
Tel. +420 387772227


Mgr. Michaela Fencková, Ph.D.

Current possitions

Group leader since 2022

Laboratory of Neurogenetics

Assistant Professor since 2021

Department of Molecular Biology and Genetics, Faculty of Science, University of South Bohemia, Ceske Budejovice, Czechia 

Previous possitions

Postdoctoral fellow 2017 – 2021

Department of Human Genetics, Radboud University Medical Centre, The Netherlands

Postdoctoral fellow 2016 – 2017

School of Life Sciences, University of Dundee, UK

Postdoctoral fellow 2011 – 2016

Department of Human Genetics, Radboud University Medical Centre, The Netherlands

Education

PhD, Molecular and Developmental Biology and Genetics 2012

Faculty of Science, University of South Bohemia, Czechia. The role of adenosine in Drosophila stress response”  supervisor: Tomáš Doležal

MSc., Experimental Biology 2016 – 2017

Faculty of Science, University of South Bohemia, Czechia

BSc., Biology 2003

Faculty of Science, University of South Bohemia, Czechia

Awards, grants and memberships

L'Oreal For Women in Science Award 2023 Read more
EMBO Installation Grant 2023 - 2027 Read more
ERC-CZ grant 2023 - 2025

“Opening novel avenues in research of neurodevelopmental disorders”

Czech Science Foundation grant 2023 - 2025

“Drosophila habituation to close the gap in genetic diagnostics of neurodevelopmental disorders”

Read more …CV Fencková

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