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Department of Chemistry

Laboratories

Laboratory of Applied Biochemistry

Laboratory of Applied Biochemistry focuses on the application of biochemical methods in various scientific fields. We apply biochemical, molecular biological, transcriptomic, genomic, proteomic techniques for the study glycobiology of ticks and tick-borne pathogens, tick-host-pathogen interactions, nanostructured surface functionalization, and the study of fish development.

 

RNDr. Ján Štěrba, PhD.

RNDr. Martin Selinger, Ph.D.

Mgr. Hana Tykalová Ph.D. post-doc

RNDr. Pavlína Věchtová Ph.D. post-doc

Mgr. Libor Hejduk Ph.D. student

Mgr. Lenka Doudová, Ph.D. student

Mgr. Zuzana Dvorníková, Ph.D.student

Mgr. Pavlína Kočová Ph.D. student (maternal leave)

Mgr. Kateřina Jaklová, Ph.D. student

Mgr. Hana Mašková Ph.D. student

RNDr. Jarmila Štěrbová Ph.D. student


Matěj Doškář, BSc. student

Ynia Encarnación, BSc. student

Valentýna Králová, BSc. student

Matěj Lácha, BSc. student

Merissa Veith, BSc. student



part-time employees:

Mgr. Zoltán Füssy, Ph.D. post-doc

Mgr. Kateryna Kotsarenko, Ph.D. post-doc, maternal leave

Mgr. Dmitry Loginov, Ph.D. post-doc

Laboratory of Analytical and Environmental Chemistry

The Laboratory of Analytical and Environmental Chemistry is engaged in the development of analytical methods and their subsequent use for the analysis of water, soil, cigarette butts, plant materials, extracts from animal faeces and selected substances in blood, serum and urine samples. Environmentally oriented research is focused on the fate of substances in the environment (e.g. organic pollutants from cigarette butts) and the photodegradation of widely prescribed drugs under light conditions relevant to natural surface waters and subsequent toxicity tests of photoproduct mixtures.

 

Assoc. Prof. Šárka Klementová – environmental photochemistry + toxicology

Dr. Pavla Fojtíková – organic pollutants and toxicology, analytical chemistry

Dr. David Kahoun – analytical chemistry

Karel Hořejší - analytical chemistry, specialisation in lipidomics (PhD student)

Martina Poncarová – study programme of Biochemistry, specialisation in environmental photochemistry + toxicology (PhD student)

Pavla Petráňová – study programme of Biochemistry, specialisation in environmental photochemistry + toxicology (PhD student)

Prof. Jan Tříska – analytical chemistry (external consultant from Global Change Research Institute of Czech Academy of Sciences)

 

Laboratory of Computational Chemistry

The research includes Molecular simulations and modeling, Ab initio calculations od biological systems etc.

Head: Doc. RNDr. Martin Kabeláč, Ph.D.

Laboratory of Mechanisms and Dynamics of Macromolecular Complexes - MACROCOMPLEX

Centre of excellence “Mechanisms and dynamics of macromolecular complexes” (Macrocomplex) is an interdisciplinary research consortium of the Faculty of Science, University of South Bohemia in Ceske Budejovice, Czech Republic.

Macrocomplex web page

Laboratory of Proteomics

Laboratory of Proteomics provides basic as well as more complex proteomic analyses of various samples. Currently, four mass spectrometers are available.


You can find us in Building C, 1st floor, Room 01 044. Contact us please if you plan to perform proteomic analyses regarding the sample preparation and discuss the costs.

Head of the Laboratory of Proteomics: Mgr. Filip Dyčka, Ph.D.

fdycka (at) prf.jcu.cz, 00420 38 903 6242

 

Employees:

Mgr. Peter Koník

konik (at) prf.jcu.cz, 00420 38 903 6242

We are currently equipped with four mass spectrometers:

Bruker Daltonics Autoflex Speed MALDI-TOF/TOF

Waters Q-TOF Premier

Waters Synapt G2-Si, hydrogen-deuterium exchange mass spectrometry

Bruker Daltonics timsTOF Pro

If you are interested in analysis of your protein samples or a collaboration, please, contact us.

Laboratory of Single-Molecule research

Our research group is taking the advantage of living on the border in between biology and physics. We are mostly focused on single-molecule research and we are currently looking for motivated students of all degrees!

Centre of Photosynthesis Research

Centre of Photosynthetic Research is a joint interdisciplinary research facility of Department of Chemistry and Department of Physics. The centre studies biochemical, biophysical and structural biological aspects of photosynthesis, especially light harvesting.

Members of the Photosynthetic research centre from Department of Chemistry:

RNDr. Radek Litvín, Ph.D.
RNDr. David Bína, Ph.D.
prof. RNDr. František Vácha, Ph.D.

Centre of Biomolecular Structure Research

Centre of Biomolecular Structure Research joins several laboratories of the Faculty of Science:

Laboratory of Structural Chemistry

Laboratory of Preparative Biochemistry

Laboratory of NMR - joint facility with RERI JKU Linz, Austria

Laboratory of Electron Tomography - joint facility with Biology Centre ASCR

 

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