Vice-dean

• doc. RNDr. Petr Jelínek, Ph.D.
  Vice-dean for development and international relations

• +420 38 777 6261
  +420 603 564 559
  or via MS Teams

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Managers

• Radka Bunešová
  Project Manager

• +420 38 777 5562
  or via MS Teams

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• Radka Jezdinská
  Project Manager

• +420 38 777 5576
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• Renata Krinesová
  Project Manager (parental leave)

• +420 38 777 5576
  +420 725 107 322

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• Tomáš Mozga
  Project Manager (parental leave)

• +420 38 777 5562
  +420 776 030 294
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• Vladimír Nousek
  Financial Manager

• +420 38 777 5562
  +420 602 438 072

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• Eva Smolková
  Project Manager

• +420 38 777 5562
  +420 771 171 051

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Chairman of the Scientific Board and Dean of the Faculty of Science USB

Internal members

External members

Department of Chemistry

Students

• Chemistry seminars schedule

  Chemistry seminars - schedule

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• Student awards and graduates

  Information about the Rector's and Dean's awards, notable student awards, outstanding undergraduate work, and a list of Chemistry Department graduates.

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• Bachelor's study programmes

  Information about undergraduate programs (Chemistry, Biological Chemistry, Chemistry for Education) with the possibility of follow-up master's degrees.

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• Master's study programmes

  Information about the Master's programs (Environmental Chemistry, Biochemistry, Biological Chemistry, Chemistry for Educationfor Secondary Schools).

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• Doctoral study programmes

  Information about doctoral programs (Doctor of Natural Sciences RNDr. - Biochemistry).

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• Brief information for applicants to Biological Chemistry study programmes

  Brief information for applicants to Biological Chemistry study programmes

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• Information for students

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  • Information for students of Chemistry study programmes.
  • Offered BSc and Msc theses topics
  • Filling the BSc and MSc assignment form
  • Info on Biological Chemistry study programmes
  • FAQs for Biological Chemistry study programmes
  • Rules and recommendations for writing of Bsc. and MSc. theses
  • Information on Bachelor and Master state exams and defences
  • Organisation of joint master state exam in Biological Chemistry
  • Re-admission of students to cross-border study programmes
  • Information on the university e-mail set-up for finishing students
  • Note for students and supervisors in relation to thetheses topics of student from EU sanctioned countries
  • information on the state exams and defences and the dresscode
  • Reimbursement of financial costs for studies

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• Information for supervisors

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Department of Physics

• Laboratory of Computer Simulations

  Modelling of physical processes on computers links theoretical knowledge with experimental observations.

  Students are welcome - projects offer numerous partial goals suitable for students' theses

  Researchers and students focus on two directions of computer simulations:

  1) Molecular simulations

  We use equilibrium and non-equilibrium molecular dynamics (MD) to study interactions of molecules. Students study interactions of molecules with surfaces and adsorption of molecules, structure, dynamics and interactions of nucleic acids oligonucleotides and their building blocks.
  When needed, these simulations are combined with ab initio quantum calculations, which yield interaction parameters used subsequently in molecular simulations of systems of sizes typically from thousands to hundred of thousands of atoms.
  The results of simulations are being compared with theory (theory of electric double-layer), experiments (X-ray diffraction, surface titration, adsorption experiments, second harmonics generation) and quantum calculations (ab initio calculations, quantum dynamics).

  Our papers investigating electrokinetic phenomena, determination of  zeta potential and surface potential

  “Molecular simulations of processes at solid-liquid interfaces”,  project LTAUSA17163, INTER-EXCELLENCE (INTER-ACTION), collaboration with Oak Ridge National Laboratory (USA), 2017-2021
  Research team:
  doc. RNDr. Milan Předota, Ph.D.
  doc. Mgr. Martin Kabeláč, Ph.D.
  Ing. Ondřej Kroutil, Ph.D.
  MSc. Babak Minofar, Ph.D.
  Mgr. Zdeněk Chval, Ph.D.
  MSc. Denys Biriukov - Ph.D. researcher, former doctoral student (biophysics)
  Mgr. Lydie Plačková - Ph.D. student (biophysics), researcher
  Bc. Patrik Musil - master student
  Foreign partner:
  Andrew G. Stack, Oak Ridge National Laboratory and members of his team: Hsiu-Wen Wang, Nikhil Rampal

  Recent project:
  “Molecular description of phenomena in electrical double layer - prediction and interpretation of experimental data by computer simulations”, standard project, Czech Science Foundation, 17-10734S, 2017-2019
  Research team:
  doc. RNDr. Milan Předota, Ph.D.
  Ing. Ondřej Kroutil, Ph.D.
  MSc. Denys Biriukov - Ph.D. student (biophysics), researcher
  Mgr. Pavel Fibich, Ph.D. - IT support.

  2) Modeling of the solar atmosphere

  Our numerical simulations are based on the solutions of magnetohydrodynamic (MHD) equations. In this case we simulate the plasma processes from macroscopic point of view, i.e. plasma is described as the conductive fluid. Our main scientific interest is focused on the problems related to the coronal heating, especially the plasma waves and oscillations which could significantly contribute to the heating of higher parts of solar atmosphere.

  For computationally extensive physical and biophysical simulations we use two local computer clusters and national computational Metacentrum

  Cluster Hermes: 

  11  machines in a rack, each 2x Quad Core Xeon E5345 @ 2.33 GHz, 16 GB RAM, 5 x 500 GB HDD, Debian GNU/Linux
  This cluster is a member of Metacentrum, local users have privileged access..

  Cluster of Department of Physics and Biophysics:

  7 PC , each Quad Core 2 Quad @ 3.0 GHz, 2 GB RAM,  500 GB HDD, SuSE 11 Linux + 2TB shared disk
  1 PC Intel(R) Core(TM) i5-2310 CPU @ 2.90GHz, 500 GB HDD, SuSE 11 Linux,  GPU GIGABYTE GTX 560 Ti Ultra Durable 1GB

  Both clusters offer parallel environment for compilation and execution of multi-processor (multi-thread) tasks and are used in teaching of classes UFY/PPI Parallel programing, UFY/PFM Computational physics - Computer modeling, UFY/SIM1  Computer simulations in many body physics and  UFY/SIM2 Advanced simulations in many body physics.

• Laboratory of Acoustics and Electronics

  The main aim of the Laboratory of Acoustic and Electronics is the sound signal processing. We cooperate with colleagues of IT Institute (UAI) and Faculty of Education (PF).

  

  We also focus on sound and building design. The sound analyzers  Bruel &Kjaer 2250 are used as well as other supplementary tools.

• Laboratory of Optical Spectroscopy

• Labroatory of Plasma Physics and Nanostructures

• Laboratory of nanomaterials physics