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Practical information

Master's in Ecology

Practical information

This page provides you with the basic practical information to help you find your way in Czechia:

  • Living costs

    As a former east-block country, the living costs are way lower in Czechia compared to west European countries.

     

    CZK (Kč)

    EUR (€)

    exchange rate

    25 (-24)

    1

    dormitory: 1 bed per month (double room - single room)
    - cost of a bed in a shared student flat is similar

    3300 - 5700

    132 - 228

    lunch in university cafeteria

    55 - 75

    2.2 - 3

    lunch in pub (work-day lunch menu)

    175 - 300 (125)

    7 - 12 (5)

    beer 0.5l in pub
    - beer is disproportionately cheap here, other beverages are more expensive

    35 - 55

    1.4 - 2.2

    bus and train ticket from Prague to České Budějovice (students below 26 years can have 25% student discount)

    180 - 230

    7.2 - 9.2

    bus ticket within České Budějovice

    20

    0.8

    You can check Numbeo to see quite realistic estimates of the local prices. Note that the prices differ between the centre of a capital and outskirts of countryside town: you will rarely see over-average prices around the university campus.

  • Campus

    Most of the building of the Faculty of Science are located in the campus of the University of South Bohemia and Biology Centre of the Czech Academy of Science.

  • Accommodation

    University dormitories
    link (Czech only, but you can see photos), This email address is being protected from spambots. You need JavaScript enabled to view it., English price list
    Excerpt from price-list (autumn 2023):
    - cheapest: a bed in a double-bed room with bathrooms shared on the whole floor (3450 CZK).
    - apartment-like: a bed in a double-bed room with bathroom shared with 4 students only (4200 CZK).
    - private: a bed in a single-bed room with private bathroom (6300 CZK)

    Private dormitory Pedagog
    link (Czech, google-translated to English)
    Excerpt from price-list (autumn 2023):
    - a bed in a double-bed room with private bathroom (6750 CZK)
    - a single-bed room with private bathroom (16750 CZK)

    Shared student apartments
    The prices are similar to dormitories ranging from 3500 CZK / bed for the cheapest fully occupied apartments to about 7000 CZK for a single room. Prices over 10000 CZK are considered too expensive, unless you want a whole little apartment just for yourself.

    Accommodation scholarship
    Most students are eligible for accommodation scholarship, which is 540 CZK monthly (2023), paid quarterly. Students are to apply in STAG.

  • Transport

    Schedules of all Czech public transport companies can be easily searched on IDOS portal, which is also in English.

    Individual companies differ in their policy on student discounts, but all of them provide a considerable discount for students under 26 years. Some companies accept ISIC, most companies require a Czech student transport card (issued at any bus or train station), the city buses in České Budějovice issue their own pre-paid student card.

    Due to the location of the town on a flat floodplain, bikes are very common, and bikesharing become very popular in last years. Many students consider buying a second-hand bike for around 2000 CZK.

  • Administrative requirements

    Foreign nationals must follow specific rules, which differ upon the country of their origin. Generally, there are much lower requirements for EU citizens than for other nationals. A comprehensive summary of the requirements can be found here. Before arrival, you should contact your Czech consulate regarding visa. After arrival, the International Office of the Faculty or University can help you with the residency issues here.

    All long-stay foreigners (incl. EU) must register at the Foreign Police. Funnily, rarely anyone there speaks English, so you would need a Czech buddy to go there with you...

  • Language

    The language is Czech - a Slavic language partly intelligible for speakers of related languages, but usually quite difficult for other foreigners. The main foreign language is English followed by German and Russian. English is mostly spread among young people, at the universities, in town centres, so you will mostly find your way. At the same time, stories about conductors of international trains or foreign police clerks who cannot say a word in any foreign language are not uncommon... Google Translate makes quite good translations nowadays.

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Students

Master's in Ecology

Students

First enrolment

Please, arrange your residency affairs in time and start gathering all required documents as soon as possible (even before admission). Note that your admission cannot be completed until we receive an appropriately authenticated copy of your Bachelor's certificate. Even a smooth visa procedure takes months, and late delivery of required documents hinders the process.

 

Winter semester

Summer semester

registration of new students

2 – 13 September 2024

12 – 14 February 2025

field trip (optional)

15 – 20 September 2024

 

start of lectures

23 September 2024

17 February 2025

  • Postponed enrolment is allowed in case of prolonged visa procedure, but you are to apply for this in advance (or within 5 days after the set date at the latest), otherwise you would be expelled.
  • The dates for next academic year are announced in April. Before the update is done, you can expect similar dates as in last year.

See all dates in academic calendar.
Most information can be found on the faculty website.
STAG is a University database of courses, their lecturers, schedule, theses etc. You will be provided password to enrol or see your study details, but you can browse almost all parts (except students' details) without login.

Fees
  • Net tuition fee: 500 EUR* per year
  • A few additional minor fees (e.g. 100 CZK for issuing the University ID card etc.)

* The fee for study in foreign language has been recently set at the University level to 3000 EUR per year, but the Faculty of Science will largely compensate it to all students. 2500 EUR reduction is guaranteed to all students fulfilling their study obligations as a scholarship. The dean may decide to waive even larger part of the fee upon request. Students study according to the rules valid at their admission, therefore there is no change in the fee (500 CZK per year) for the current students including students admitted in November 2023.

The main fees are given by the Statutes of the University (Articles 27 and 28).

Scholarships and grants

Scholarships for all students during the whole study:

  • Extraordinary scholarship for support of students of study programmes conducted in English language. 2500 EUR per year will compensate most of the tuition fee to all students fulfilling their study obligations.
  • Accommodation bursary about 540 CZK monthly (~22 EUR) (paid quarterly) is intended to cover part of living costs for all students with permanent residence outside the České Budějovice district. There are a few other conditions (e.g. students whose living costs are already covered by other scholarships are not eligible), but usually all students of this programme receive it.

Premium scholarships for excellent students in the second year of study depending on the achievement in the first year:

  • Students with excellent study results can receive 2,000 CZK monthly (~80 EUR) during their second year. For this, students must reach 60 credits and GPA<1.2 in their first year. This scholarship is awarded automatically.
  • Top 20 students across all BSc. and MSc. programmes of Faculty of Science with excellent study and research results get a bonus of 1,200 - 3,000 CZK monthly (~48 - 120 EUR) for publishing in Impact Factor journals or presenting at a conference while maintaining very good study results (60 credits in last year, GPA<1.5). Apply by 15 October or 10 March.
  • Dean's price for the best Master thesis of 5,000 CZK (~ 200 EUR).

See the provision of the dean for details of the scholarships. The amount of accommodation bursary is updated yearly by the rector.

Applicants from some countries can also apply for a scholarship of Czech Ministry of Education, Youth and Sports. This scholarship is out of our control, see detailed information on the ministry website or contact Czech consulate in your country.

Students' research can be supported by several grant agencies; the most relevant for this study programme is Student Grant Agency (SGA) of the Faculty of Science.

Study plan

You are to enrol for courses before the start of each semester. You need to get min. 120 credits during your study, which implies you should aim at min. 30 credits per semester to finish your study in time. It is usual to enrol a bit more courses in the first semesters to have more time for your thesis in the last semester.

There are two obligatory courses (type A) in this Master's programme: "Master Thesis, Practical Part" for 13 credits (in each semester except the first one when it is facultative-obligatory - type B) and "Ecology Colloquia" for 2 credits (once per year, recommended in 2nd and 4th semester). In addition, you are to enrol any courses to get over the 30 credits per semester. When compiling your study plan, remember that you are to enrol facultative-obligatory courses (type B, "core courses") for min. 53 credits during the whole study. (There was a recent change in the study plan: the old plan until 2021/2022 defined Master Thesis as type A in all four semesters and min 40 credits from B courses, while in the new plan since 2022/2023 the Master Thesis in the first semester was changed to type B and therefore the min number of credits from B courses increased.)

See Study and Examination Regulations of USB and Provision of the Dean for more details.

Enrolment takes place in two steps (see the dates in academic calendar).

  • Electronic enrolment (Jun, Jan) - You select in STAG which courses you would like to attend in the next semester. Courses where too few students enrolled may be cancelled, which is announced in the news on the main faculty website short after the end of enrolment.
  • Confirmation of enrolment (Sep, Feb) - You are to present yourself at the department of study affairs to confirm the list of your courses. You can make minor justified adjustments, e.g. remove or replace courses that were cancelled.
Thesis topic and supervisor

You are to find a supervisor and agree on a topic of your thesis during the first semester. Take your time to browse websites of academic departments of the Faculty of Science (mainly Botany, Zoology, Biology of Ecosystems) and institutes of Biology Centre CAS (mainly Entomology 1, 2, Hydrobiology), or Institute of Botany CAS in Třeboň. Talk to several people. Finally, the supervisor will confirm whether you have successfully passed the course "Master Thesis, Practical Part". Find your supervisor in time, so that you can start working soon and the supervisor is happy to confirm your work.

You need to fill a form for assignment of Master thesis and submit it to the Department of Student Affairs. At the same time, you enrol the obligatory course Master Thesis, Practical Part with a code of the department where your supervisor is based (usually KBO/881, KZO/881 or KBE/881), so that you are registered at the right department.

Links to working groups

University of South Bohemia, Faculty of Science:

Department of Botany

Functional Plant Ecology - Jan Lepš

Restoration Ecology - Karel Prach

Department of Zoology

Centre of Cognitive Ethology - Roman Fuch, Petr Veselý

Department of Biology of Ecosystems

Czech Academy of Science, Biology Centre in České Budějovice:

Institute of Entomology

Department of Ecology - Kateřina Sam

Laboratory of Multitrophic Interactions - Kateřina Sam
Laboratory of Evolutionary Ecology - Martin Volf
Laboratory of Tropical Ecology - Vojtěch Novotný
Laboratory of Experimental Ecology - Jan Hrček
Laboratory of Molecular Ecology and Phylogenetics - Pável Matos-Maraví
Laboratory of Integrative Ecology - Jan Klečka

Department of Biodiversity and Conservation Biology - Lukáš Čížek

Laboratory of Woodland Ecology - Lukáš Čížek
Laboratory of Aquatic Insect Ecology - David Boukal

Institute of Hydrobiology

Institute of Botany in Třeboň

Department of Functional Ecology - Jiří Doležal

Submit your thesis

The thesis is submitted to STAG about 1 month before the end of teaching period of your last semester. Please, check the exact date in the academic calendar in advance. Other requirements (format, mandatory sections...) are described in detail in Provision of the Dean. Your supervisor will advice you not only on the content but also the form of the thesis. You should also see several submitted theses to see examples of the form (freely available in STAG). Hardcopies are not required since 2021. Together with submission of your thesis (on-line in STAG), you are to visit the Department of Student Affairs to apply for the State Final Exam.

End of study

At least three days before the final state exam, you are to come to the Department of study Affairs to check your study results and close your study (make sure in advance that you have got all grades in STAG).

The study ends with state final exam, which has two parts. First, you are to defend your Master thesis at a committee of lecturers. Second, a similar committee of lecturers will examine you at an oral theoretical exam, which has three parts:

  • Fundamentals of Ecology
  • a field of student's choice: Plant Ecology, Animal Ecology or Ecological Statistics
  • Theoretical Background of the Master Thesis Topic and Methodology

The diploma (Master's degree certificate) is handed over the students at a graduation ceremony, which usually takes place about 1.5 months after the final state exam. In case you need to leave Czechia or apply for PhD earlier and/or do not want to take part in the ceremony, ask the Department of Student Affairs when you can pick it up.

Seminars
  • Ecology Seminar - Tuesday 16:20 in B2 - info at Department of Botany
  • Kokomo Seminar - Wednesday 12:00 in seminar room of the Entomology institute - ask Kateřina Sam (This email address is being protected from spambots. You need JavaScript enabled to view it.) to add you in the mailing list (may run online on zoom).
  • Zoology Seminar - Students - Wednesday 13:15 in B3; hosts - Wednesday 15:00 in B3; some students and most hosts present in English, info at Department of Zoology
  • Ecology Colloquia - obligatory course, not scheduled. You are to attend the previous seminars as well as present the plan of your thesis (in 2nd semester) and results of your thesis (in 4th semester).
Non-standard situations

The standard procedures were briefly mentioned above, but you may encounter exceptional situations. Please, always refer to the official documents of the Faculty and University or contact the Department of Student Affairs. Here is just a brief outline:

  • Enrolment: You are to enrol every semester in a standard date. If you missed enrolment, your study would be terminated. You can enrol later but you have to apply for it in time and justify it properly. You may also want to enrol earlier (e.g. in case a field trip overlaps with the standard date of enrolment).
  • Courses: You register for courses at enrolment, but you can make changes later. Changes done within three weeks of the study period are easy (simple email to the Department of Study Affairs). A properly justified application in STAG is required after the third week. You cannot unregister from block courses (e.g. field trips) after the course has finished.
  • Credits: You need to get min. 120 credits during your study, which implies you should aim at min. 30 credits per semester. However, the minimum number of credits per semester is 20, not to get expelled. You are allowed to have less only in case you have already more than 120 credits (typically last semesters of "longer study"), and in case of a special study plan (e.g. in case of serious health reason). Also, remember you must get min. 53 credits from the facultative-obligatory courses (type B).
  • Failed courses: If you fail a course, you do not get the credits. It has no other implications, if you still meet the minimum criteria on the credit gain by other courses, unless you fail an obligatory or facultative-obligatory course (i.e. type A or B) when enrolled for the second time.
  • Length of study: The study takes two years. Most students finish in time, but various life situations may lead to longer study.
    • study longer by <1 year: no application needed, no tuition is paid (just the usual 500 CZK/year fee for study in English). You simply do not register for the final state exam at the end of your second year and regularly enrol for the next semester (at least Master thesis XXX/880 for 0 credits as a placeholder). You keep the student status and you must follow usual study rules.
    • study longer by >1 year: similar to previous point, but you pay an additional tuition fee (approx. 25.000 CZK per semester)
    • suspended study: you can apply to suspend your study for up to two years. During this time, you lose the student status, i.e. you do not need to follow any study rules, as well as you have no advantage related to your residency in this country. After solving your life situation, you can continue in the study. You need to apply for suspension and termination of suspension, usually before start of semester.
  • Pregnancy/maternity: you can apply for a special study plan or you can suspend your study (in that case, your study can be suspended for longer than the usual 2-year limit).

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Courses

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Admission

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Applicants

Master's in Ecology

Applicants

Brief study outline

The study takes two years divided into four semesters. During this time, students must obtain 120 ECTS credits. Work on master thesis (incl. presentation of your research on two seminars) accounts for 43(-56) credits, (40-)53 credits must be acquired from the core courses and the remaining 24 credits from core or additional courses. A master thesis based on a research project must be submitted and defended at a committee of lecturers. A committee also evaluates student's knowledge at a final state exam composed of three parts: Fundamentals of Ecology, a field of student's choice (Plant ecology, Animal Ecology or Ecological statistics) and Theoretical background of the master thesis topic and methodology.

The net tuition fee is 500 EUR* per year. The funding options are summarized in the section for students, official information can be found at the main faculty website.

* The fee for study in foreign language has been recently set at University level to 3000 EUR per year, but the Faculty of Science will compensate 2500 EUR to all students as a scholarship. The dean may decide to waive even larger part of the fee upon request.

  • Admission

    General information

    The admission procedure follows the Decision of the Dean. Below is a list of the most important points.

    Eligible applicants are to hold a Bachelor's degree based on at least 3-year university study of any field. Delivery of a certified copy of the degree is required after admission interviews (early delivery speeds up the visa process). In the first round of the admission procedure, the admission committee evaluates the motivational letters. Shortlisted candidates are invited for the second round based on an on-line interview. We will evaluate:

    • scope of ecological knowledge,
    • relevance of research interests, experience, and plans,
    • ability to communicate in English at a level sufficient for the study.

    Applications

    You can apply by submitting:

    • Application: on-line form with your personal data
    • Application fee: 700 CZK (approx. 30 EUR)
    • Motivation letter: introduce yourself, explain your motivation for joining this study programme, and your previous experience in ecology including the description of your Bachelor’s (or similar) research project (aims, methods and key findings) in no more than 300 words. The format is not specified; be concise, do not waste space with formal statements, present key points of your career.
    • Proposal of Master's project: supplement the motivation letter (possibly in a single file) with a proposal of your ideal Master’s research project in 300 words maximum. Although short, it should include the aims, their justification, and the methods. (This will not be necessarily your actual MSc Thesis, but it is the theme that will be discussed with you in the admission interview.)

    The University does not require any other documents at the time of application, but your Bachelor's certificate is required later for admission.

    e-application Submit your application on-line .

    The e-application includes payment of the application fee by card. Alternatively, you can pay the application fee by bank transfer:
    Account number: 104725778/0300
    IBAN: CZ20 0300 0000 0001 0472 5778
    SWIFT/BIC: CEKOCZPP
    Bank address: Československá obchodní banka, a.s. Radlická 333/150, 150 57 Praha 5
    Variable symbol: 6020106
    Specific symbol: the number of the electronic application form generated by the electronic registration system
    Payment note: full name

    Important dates:

    New students are admitted twice a year in the following schedule:

    Application procedure opens February 2024 July 2024
    Deadline for application 19 May 2024 31 October 2024
    Deadline for delivery of Bachelor's certificate* 13 June 2024 6 February 2025
    On-line interview 1-2 weeks after application deadline
    Decision on admission** 1 week after interviews
    Start of study (see student's section) September 2024 February 2025

    * Applicants can apply for a little extension of the delivery of Bachelor's certificate if they expect long postal delivery time.

    ** Applicants are informed a few days after the interview whether they were successful, formal letter of admission can be issued only after authenticated copy of Bachelor's certificate is delivered.

    The dates for next academic year are announced in January. Before the update is done, you can expect similar dates as in last year.

    Certification of Bachelor's degree

    You are to submit a certified hardcopy of your Bachelor's diploma which is to be recognized by our Vice-dean for Bachelor and Master Studies. The types of diplomas/certificates and legal requirements differ widely between countries. It is therefore recommended to send us (This email address is being protected from spambots. You need JavaScript enabled to view it.) in advance just a scan of your documents and we will inform you about what is required from you. There are various levels of document authentication and translation to Czech or English may be required in some cases.

    Although we do not require your Bachelor's certificate for application, it is required for admission. Before your certificate is received, the University cannot issue the official letter of admission and consequently you cannot apply for visa. Therefore, we strongly recommend sending us your certificate as soon as possible (even before admission) to avoid unnecessary delay.

    International administration - visa

    In addition to the requirements of the University, you will need to undergo a standard migration procedure depending on the country of your origin before arrival (visa, health insurance...). A comprehensive summary of the requirements can be found here. Note that obtaining student visa takes months in most countries. You can make the process faster by:

    • applying in advance for all documents required by the consulate
    • posting us in advance your Bachelor's degree certificate
    • applying for Student Facilitation Programme (via University)

    Student Facilitation Programme ("Režim Student" in Czech) enables priority arrangement of a meeting at the consulate, so that you do not wait long to submit your application (you get a date within two weeks). However, you must have originals of all necessary documents gathered already. This implies, that before applying for the Student regime, you must send us the authenticated copy of you Bachelors degree, and after receiving, we will send you back the letter of acceptance as well as the accommodation contract. Note that posting the documents takes several weeks.

    Additional information

    See the students' section for more information on the enrollment, further course of the study, fees, scholarships etc.

    Applicants from some countries can also apply for a scholarship of Czech Ministry of Education, Youth and Sports. This scholarship is out of our control, see detailed information on the ministry website or contact Czech consulate in your country.

  • Courses

    Faculty of Science offers increasing number of courses in English. Below is a list of courses included in the Master in Ecology. Students must acquire at least 40 credits* from the core courses. The list of additional courses is continuously growing.

    Core courses

    Design and Analysis of Ecological Experiments

    phee-courselecturers: Jan Lepš, Petr Šmilauer
    content: You will learn the basics of experimental design (emphasizing field experiments and including various nested designs) and mainly their statistical evaluation using general linear models, methods of unconstrained and constrained ordination (with Canoco), and classification methods. You will learn all this using real-world data examples.
    credits: 6
    links: home


    Community Ecology

    commecol-courselecturers: Jan Lepš, Vojtěch Novotný
    content: The course includes basics of community diversity research: quantifying and interpreting community diversity, relationships of community diversity with other characteristics, i.e. both diversity as response to environmental factor, and as a driver in biodiversity experiments. Further topics include community assembly rules, mechanism of species coexistence, food web research, use of the null models. It is usually preceded by a field data collecting trip.
    credits: 6
    links: home


    Functional Traits in Ecology

    traits-courselecturers: Lars Götzenberger, Francesco de Bello
    content:The course aims to provide updated concepts and methodologies on the use of functional traits in Ecology, encompassing different trophic levels. Particular attention will be given to the use of species traits to understand ecological processes, such as niche partitioning, species interactions, community assembly and ecosystem processes, and as tools in bioindication schemes (including indication of ecosystem services).
    credits: 4


    Modern Regression Methods

    mrm-courselecturer: Petr Šmilauer
    content: This course introduces you to several important families of advanced regression models, with particular attention paid to generalized linear models (GLM), generalized additive models (GAM), classification and regression trees (CART), and survival analysis, together with the linear mixed-effect models or methods of phylogenetic corrections. Work with the real-world data takes about two thirds of the course, relying exclusively on the free R software.
    credits: 6


    Ecology of Invasive and Expansive Organisms

    invasive-courselecturer: Karel Prach, Ondřej Mudrák
    content: Main aspects of invasive behavior of alien and expansive native organisms, especially vascular plants, are explained. Theoretical principles of invasive ecology are accompanied by examples from central Europe as well as other parts of the World. Not only processes of invasion and expansion but also eradication of noxious organisms and restoration of native communities are considered.
    credits: 4


    Tropical Ecology

    tropical-eco-courselecturer: Vojtěch Novotný
    content: This course gives an introduction to main tropical ecosystems and further covers such themes as why there are so many species in the tropics, how they are organized in food webs, how is ecological succession going, what is happening on tropical islands, or why and how to protect tropical biodiversity. The course includes also seminars where we discuss and analyze important and interesting research papers.
    credits: 4


    Conservation Biology

    conservbio-courselecturer: Jana Jersáková, Tomáš Kučera, Martin Konvička
    content: This course focuses on up-to-date theory, practice and ethics of biological conservation from the level of genes, to wild populations and to entire ecosystems. The course includes several excursions to outstanding protected areas and semestral work developing an action plan for a critically endangered species.
    credits: 6


    Evolutionary Ecology

    lecturer: David Boukal
    content: The course gives an overview of the main concepts and classic methods used to study life histories and behavioral and other evolutionary adaptations of organisms to their environment. Emphasis is given on case studies that establish links between theory and empirical observations. The course also involves critical reading and discussion of both classical and recent papers and hands-on practicals with quantitative examples.
    credits: 6


    Field Ecology

    field-ecology-courselecturers: Jan Lepš, Petr Blažek
    content: The course gives an overview of the problematics to be faced when developing ecological surveys and experiments in the field. Several excursions will be carried out during one week, where various sampling techniques will be used, and student will carry out simple field experiments in different habitats around either Mohelno or Křivoklát. At the end, students present results of their independent projects.
    credits: 4


    Molecular Ecology

    lecturer: Václav Hypša
    content: The course provides an overview of current approaches to utilizing molecular data in ecological, phylogenetic and evolutionary research. It covers the main techniques used at the genealogical and population level (haplotype networks, multilocus analyses, coalesence-based inferences of demography, selection and other evolutionary processes) and the basic principles of molecular phylogenetics (maximum parsimony, maximum likelihood, Bayesian probability).
    credits: 4


    Creative Publishing in Community Ecology

    creativepub-courselecturers: Jan Lepš, Francesco de Bello, Lars Götzenberger, Jan Hrček
    content: This course aims at publishing one paper in collaboration with other students, with the aim of showing how to creatively choose and use data to answer possible ecological questions. Field data will be available and students, as a group, will choose how to use the data, analyze it and prepare a manuscript for publication. The process will be assisted by a former editor of J. App. Ecol. and J. Veg. Science and by a current editor of PLoS One and J. Veg. Science.
    credits: 6


    Population Ecology

    populecol-courselecturer: Jan Lepš, Petr Blažek
    content: The course provides basis of population ecology, attempting balanced presentation of methods of the field research, basics of mechanisms, and mathematical models. The topics include descriptive approaches to populations size, structure, spatial pattern and temporal variability, basics of population growth (including projection matrices and integral projection models) and basics of interspecific interactions.
    credits: 5


    Vegetation Dynamics

    vegetdyn-courselecturer: Karel Prach
    content: Principles of vegetation dynamics from the population to global perspective are presented. Theoretical aspects are illustrated by real examples from different parts of the World. Practical applications in conservation biology and restoration ecology are also presented.
    credits: 3


    Tutorials in Ecology

    lecturer: Jan Hrček
    content: A course designed to improve critical thinking through working with literature, writing essays and discussing them with tutors (a panel of lecturers and postdoctoral researchers at Faculty of Science and Biology Centre). The course is modelled after Tutorials, a common way to teach at Oxford and Cambridge.
    credits: 4


    Science Communication

    sciencecommunicationlecturer: Kateřina Sam
    content: Communicate your research from the field to a conference hall and to a scientific journal.
    This course will prepare you for common types of communication you will need (not only) in science. Giving presentations, but also preparing an experiment, proposal or write a grant (and possibly get it!). Other forms include letter to editor when submitting your research to a journal and advise on outreach and communicating your research to the public.
    credits: 4


    Plant-Animal Interactions

    plantanim-courselecturer: Jana Jersáková, Lukáš Čížek, Štěpán Janeček
    content: The course familiarizes students with the current literature, mechanisms, and conceptual bases of herbivory, pollination, seed dispersal, and plant defense, and provides understanding and practice to the scientific methods during field experience. The course includes a field trip where the students perform their own projects.
    credits: 6


    Evolutionary Biology

    evolbiol-courselecturer: Pavel Duda
    content: This course provides and introduction to evolutionary biology. It describes key evolutionary processes, both micro- and macroevolutionary. It describes the relationship between micro- and macroevolution, evolution and ontogeny, and evolution and phylogeny and emphasizes the importance of phylogenetic approach in biology and ecology using a multitude of case studies.
    credits: 3


    Microbial Ecology and Genomics

    microbialecology-courselecturer: Eva Nováková
    content: This course provides the students with a combination of theoretical background and practical skills in modern approaches of microbial ecology. With emphasis on symbiosis, the students will learn how to sequence, analyze and understand the functions of bacterial genomes and the structure of bacterial communities in various environments.
    credits: 3


    Molecular Phylogenetics

    lecturer: Václav Hypša
    content: The course provides an overview of basic techniques and data types in various areas of phylogenetic inference.
    credits: 6


    Biogeochemistry

    lecturer: Petr Čapek, Hana Šantrůčková
    content: An overview of biogeochemical processes on local, continental or global scales, both in natural conditions and under human impact. The course will make students familiar with cycling of major elements in preindustrial periods in the Earth crust, waters, atmosphere and soil and compare them with present and future situations modified and magnified by human activities.
    credits: 2

    Additional courses

    Biology of Social Insects

    lecturers: Petr Klimeš, Jan Šobotník, Jakub Straka
    content: The course provides survey of the basic phenomena related to organization of insect societies; particularly: evolution of eusocial taxa, origination of social behaviour, ontogeny, communication, ecological and economical importance of social insects. The lecture includes overview of the most important aspects of life of social insects and place them into the evolutionary and functional context. The main taxonomic focus is on the biology, evolution and ecology of termites, bees and ants.

    Restoration Ecology

    lecturer: Karel Prach
    content: The course introduces the basic ecological principles underlying successful restoration, methods of designing restoration projects using spontaneous and directed succession. Examples from different parts of the world as well as Czechia are presented, including both theoretical and practical aspects.

    Biostatistics

    lecturer: Petr Blažek
    content: Introduction to the basic principles of statistical thinking. Special emphasis is put on practical use of statistical analyses for data processing in R. The students should be able to process their own data for bachelor theses and follow the advanced statistical courses.

    Advanced Regression Methods

    lecturer: Petr Šmilauer
    content: Students will learn advanced ways of modelling data in natural sciences, with a focus on models with a combination of random and fixed effects and also on the selection of model complexity. Students should be enabled to work with such statistical models independently in their research. 

    Behavioral Ecology

    lecturer: Petr Veselý
    content: The course presents the basic topics of behavioural ecology. Besides the basic topics, a significant importance will be put to the recent trends in the research of behaviour in animals together with the vision in the future and with the topics, which are under research at our faculty.

    Advances in Behavioral Ecology

    lecturer: Petr Veselý
    content: A journal club

    Open Source GIS

    lecturer: Stanislav Grill
    content: The course aims to extend the analytical skills of students in the processing of environmental spatial data. The topics within course are not focusing on theory of spatial ecology but mostly on practical tasks of data processing in free open-source GIS software. An important aspect of the course is the selection of the software which is freely available and/or have open source code.

    Fungal Ecology

    lecturer: Martina Vašutová
    content: Students will obtain basic knowledge on fungi, their importance in ecosystems and interactions with other groups of organisms. Understaning the concept of an individual, population and community in mycology, main drivers of fungal assemblages and mechanisms of fungal spreading. Information on fungal conservation.
    Within practicals students will be introduced to current trends and methodological approaches in fungal ecology. 

    Field Mycology

    lecturer: Martina Vašutová
    content: Four days of field excursions, training in field mycology (herbarium specimens, microscopy, mycological inventory). Evening lectures introduce fungal ecology and conservation.

    Biology of Animals

    lecturer: Oldřich Nedvěd
    content: A basic course of zoology, designed for students specialized on other fields of biology, taught in two parts: The first, common part explains phylogeny and adaptations of main animal lineages. The second part is taught separately, focused either on ecology, biogeography and conservation, or on comparative approach to general zoology and an evolutionary approach to the experimental model species of animals.

    Biology of Plants

    lecturer: Jan Kučera
    content: A basic course of botany, designed for students specialized on other fields of biology, taught in two parts: The first, common part explains phylogeny and adaptations of main plant lineages. The second part is taught separately, focused either on ecology, biogeography and conservation, or on plant anatomy, morphology, physiology and development.

    Studying Plants and Fungi Belowground

    lecturers: Marie Šmilauerová, Petr Šmilauer
    content: You will learn the essential skills for investigating the life of plants and symbiotic fungi in the soil. The methods will cover e.g. root biomass quantification, root morphology and architecture, or observing AM fungal symbionts.

    Forest Ecology

    lecturers: Jiří Doležal, Jan Altman, Lukáš Čížek
    content: Basic structures and functions of forest ecosystems, examples of main forest types in temperate and boreal zone in Northern hemisphere.

    Ecology of Alpine Ecosystems

    lecturers: Jiří Doležal
    content: Fundamentals of ecology of mountains, principal groups of algae and plants there, selected localities as examples of stands, principles of adaptation to extreme conditions.

    Molecular Methods in Plant Science

    lecturers: Petr Koutecký, Jiří Košnar
    content: Presentation of methods of molecular biology used to infer genetic variation of plants, especially at lower taxonomic levels (genus, species, populations); the main research objectives include population genetics, microevolutionary processes, phylogeography. Selected methods will be practices in the laboratory.

    Practicals of Multivariate Analysis of Ecological data

    lecturers: Jan Lepš, Petr Šmilauer
    content: Students develop two different research "projects" starting from the data preparation into a form needed for their analysis, application of multiple statistical methods (appropriate for the questions being asked), up to the presentation of obtained results. Each student will practice both a written presentation of the project conclusions, as well as the oral presentation, and participation in a guided discussion. 

    Modelling for Ecologists in R

    lecturer: David Boukal
    content: The course presents key principles and approaches to process-based modelling in population, behavioural and evolutionary ecology, using examples in R. The aim is to provide students with practical skills for their own work.

    Ecology seminar

    content: Lectures of invited speakers, often from other universities in Czechia and the world.

    Language courses

    You can enroll in several English-taught language courses to improve your language skills:

    • Academic Writing
    • Scientific Writing
    • Presentation Skills in English
    • English for Science
    • English for Workplace
    • English for TOEIC
    • English for Intercultural Communication
    • ...
    • Spanish, French, German, Russian
    • Czech for foreigners
  • Excursions

    Join our fieldtrips

    Field Ecology

    mohelno-excursionA one-week trip to Mohleno (SE Czechia) or Křivoklát (W Czechia) offers students to learn basic field-sampling methods. Since the excursion takes place just before the start of the winter semester (mid-September), we recommend this for new students to meet their course mates. (KBO/192E)


    Polar Ecology

    polar-excursionThe course of Polar Ecology includes a field trip to Svalbard.
    This excursion takes place every year. Follow the news on the faculty website not to miss the application deadline. (KBE/263+KBE/265)


    Tropical Ecology

    papua-excursionThe course of Tropical Ecology is supplemented by a field trip to Papua New Guinea. The expedition includes trips to all basic types of natural environment in PNG: diving on coral reefs, working at a research station in a lowland rainforest, canoe rides in mangrove swamps, climbing through misty forests up to the top of Mt. Wilhelm, 4500 meters a.s.l., visiting a volcano island or dancing decorated with war paint and feather headdresses with indigenous people.
    The excursion takes place once in two years, so only some of you would have a chance to take part. (KBE/355)


    Biomes of Europe

    biomes-excursionA bus tour to distant parts of Europe visits European biomes. Destinations of past years: North Macedonia (2024), Corsica (2023), Bulgaria (2022), covid break (2020-2021), Spain (2019), Poland and Ukraine (2018), Greece (2017), France (2016), Spain (2015), Serbia (2014), Scandinavia (2013), Romania (2012)... (KBO/191)


     Vegetation Ecology

    geobot-excursionThe four-day bus excursion is focused on presentation of main vegetation types of Czechia. Geological, historical and cultural phenomena are also presented in mutual interactions with the vegetation pattern and dynamics. (KBO/126E)


    Alpine Botany

    Several other courses include a field trip within the course (e.g. Community Ecology, Population Ecology, Plant-Animal Interactions)

  • Lecturers

    Guarantor of the Master's study programme

    Jan Lepš

    My main interest is plant ecology, with major projects connected with mechanisms of species coexistence and stability in temperate grasslands, but I also work in tropical forest ecology. Further, I am interested in data analysis, and particularly in the multivariate data analysis.
    Functional plant ecology

    Lecturers

    Vojtěch Novotný

    A tropical ecologist studying plant-insect food webs in the rainforests of Papua New Guinea (and teaching about them in Europe).
    Laboratory of Tropical Ecology

    Karel Prach

    prach-peopleAuthor of various publications in restoration ecology, vegetation ecology and ecology of invasive organisms. He has especially studied vegetation succession in various human-disturbed as well as naturally disturbed sites in the Czech Republic and in various parts of the world.

    Petr Šmilauer

    petrsmMy research interests cover multivariate statistical methods, modern regression modelling, and the ecology of arbuscular mycorrhizal fungi in grassland ecosystems.

    David Boukal

    boukal-peopleMy research focuses on ecological and evolutionary processes in aquatic habitats. The lab uses a combination of lab and field experiments and mathematical modelling to understand and predict the impacts of environmental stressors on individual life histories, trophic interactions and community structuring. Our main emphasis is on freshwater invertebrates in standing waters but we also work with fish.
    link

    Jan Hrček

    hrcekMy research interests are community ecology, symbiosis and evolutionary ecology. In my lab we experimentally address stability of communities, their response to global change and invasions. We use a model system based on wild Drosophila communities which allows us to link laboratory and field research. I have close ties with University of Oxford where I am research associate.
    lab webpage

    Kateřina Sam

    sam-peopleMy main interests are interactions between trophic levels, predation and community ecology. I work along large environmental gradients (latitude, altitude) but also locally. I focus on birds, bats, ans and spiders as focal predators, and I study their impact on arthropod communities
    Laboratory of Multitrophic Interactions

    Lars Götzenberger

    goetzenberger-peopleI study plant community ecology through species traits and phylogenetic relationships. The main focus is on how traits and phylogeny imprint on species ecological strategies, and how this influences the assembly and stability of communities. From a technical site, I have a keen interest in R programming and ecological data bases.
    link

    Petr Veselý

    vesely_peopleOrnithologist and behavioural ecologist focusing on interspecific bird interactions (predators, competitors) communication about danger and interactions of birds and their prey (warning signals, camouflage).
    Centre of Cognitive Ethology

    Francesco de Bello

    debelloAuthor of various publications on functional trait diversity. He is trained as a plant ecologist and agronomist. Using meadows and alpine vegetation as a study framework, he assesses the role of functional trait diversity on the interface between community assembly and ecosystem service delivery. His interests also include the effects of land-use changes on vegetation, and particularly grazing and mowing, and the development of integrated biodiversity indicator systems to monitor the effects of these changes in interaction with climate change.
    Functional plant ecology

    Jana Jersáková

    jersa-peopleMy main interest is plant ecology, focusing particularly on ecological aspects of life-strategies of terrestrial orchids, and factors affecting plant distribution, such as dependence on specific mycorrhizal fungi and specialized pollinators.

    Pavel Duda

    duda-peopleI am a zoologist specializing in human evolution. My research topics include evolution of primate behavior, human population history, and evolution of culture using a broad spectrum of phylogenetic comparative methods.
    link

    Eva Nováková

    novakova-peopleI am generally interested in bacterial symbioses of blood sucking vectors. My research focuses on evolution, function and dynamics of various forms of symbioses from loosely associated bacteria in complex microbiomes to obligate mutualists with extremely reduced genomes.
    link

    Pável Matos Maraví

    matos_peopleI aim to understand the evolutionary drivers of biodiversity. I mainly use genomic and ecological data to infer the origin and evolution of diverse tropical groups. My research topics range from describing the ecological and evolutionary processes shaping phenotype evolution, trait-associated dispersal and speciation, to population genomics of butterflies.
    link

    Hana Šantrůčková

    hasan-peopleSoil biology and biochemistry, nutrient transformation, stable isotopes in ecological studies.
    link

    Václav Hypša

    Molecular phylogeny and evolution of insect-associated bacteria, co-evolutionary studies in host-parasite systems, molecular phylogenetics in the evolutionary studies of parasitic groups.
    link

    Petr Blažek

    I study plant ecology in grasslands. My main focus covers population ecology of hemiparasitic plants, but I participate in several other research projects and I want to bring the results of research closer to farm practice. I teach Population Ecology, a basic course of Biostatistics, and lead a Field Ecology trip.

    I am in charge of communication with applicants in this study programme.

  • Theses

    Large part of your study (almost half the credits) is formed by work on a research project, results of which will be reported in a Master Thesis and possibly published in a renowned scientific journal.

    You can do your thesis project with any principal investigator at Faculty of Science or Biology Centre CAS (even when not listed on this page). Below are a few thesis themes proposed by some of the possible advisors, but the options are much wider. You can contact the supervisor to ask for more details or other possibilities. We also encourage you to come with your own idea!

    • Predator-prey-plant interactions in various habitats
    • Multitrophic interactions between spiders, birds and plants
    • Stress responses of insect to presence of predators and the impact of insect's stress on lower trophic levels
      supervisor: Kateřina Sam
     sam-theses
     restoration-thesis
    • Restoration of urban areas (e.g. biodiversity of flower strips, biodiversity roofs, urban grasslands)
    • Successional changes of vegetation in disturbed sites (post-mining sites, grasslands, post-military areas, wetlands)
    • Effect of large herbivores on vegetation development
    • Active restoration of grasslands (seed mixtures, biomass transfer)
      supervisors: Karel Prach, Klára Řehounková, Ondřej Mudrák
    • How do the birds recognize their predators?
    • Which processes establish the ecological niches of closely related bird species?
    • Which factors affect the ability of various bird species to search for cryptic insect prey?
    • Are the birds able to understand alarm calls of other species?
      supervisor: Petr Veselý
     vesely_thesis
     hemipar2
    • Meadow hemiparasites as ecosystem engineers
    • Ecological benefits and economic sustainability of organic farming.
      supervisors: Jan Lepš, Petr Blažek
    • Aquatic life in post-industrial environments
    • Urban environments and the heat island effect in aquatic invertebrates
    • Impact of microplastic pollution on individual life histories and trophic interactions in aquatic invertebrates
      supervisor: David Boukal
     boukal_diplomky
     hrcek-theses
    • How does species loss affect the extinction risk of the remaining species?
    • Do multitrophic communities respond similarly to shifts in mean temperature and variability of temperatures?
    • How can we use species’ traits as proxies to predict trophic interaction strength?
      supervisor: Jan Hrček

    Ethology and cognition of primates and naked mole-rats

    • Differences in reactions to mirror and video experiments in marmosets
    • Effect of social environment on individual behaviour of naked mole-rats
    • Variability in behaviour of naked mole-rat individuals in response to smell of predators
      supervisors: Martina Konečná, Vedrana Šlipogor
     slipogor_thesis
     benesov-thesis
    • Coexistence of grassland plant species depending on their functional and phylogenetic dissimilarity
    • Floral traits in community assembly
      supervisors: Francesco de Bello, Lars Götzenberger
    • Phylogenomics and population genomics of tropical butterflies
    • Thermoregulation in butterfly communities
    • Bioinformatics in Ecology: Mining genes and endosymbionts from butterfly genomes
      supervisor: Pável Matos Maraví
     
     belowground-course
    • What role play the non-mycorrhizal plant species in the structure and maintenance of the community of arbuscular mycorrhizal fungi?
    • Change of arbuscular mycorrhizal fungal communities in model grassland plant species during their ontogeny
      supervisor: Marie Šmilauerová
    • Plant-herbivore interactions along ecological gradients
    • Evolution of plant chemical defences
    • Chemical communication between plants, herbivores, and predators
      supervisor: Martin Volf
     volf-thesis
         

     

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