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Written by Lenka Chodáková on . Posted in PRF.

Publications

Department of Molecular Biology and Genetics

Publication database 2023-2024 (as of August)

Selection of publications of scientific groups of the Department of Molecular Biology and Genetics

(students and Ph.D. candidates of the department in bold)

2024 (as of July)

Fluks M, Collier R, Walewska A, Bruce AW, Ajduk A. (2024) How great thou ART: biomechanical properties of oocytes and embryos as indicators of quality in assisted reproductive technologies. Frontiers in Cell and Developmental Biology. https://doi.org/10.3389/fcell.2024.1342905

Kazek M, Chodáková L, Lehr K, Strych L, Nedbalová P, McMullen E, Bajgar A, Opekar S, Šimek P, Moos M, Doležal T. (2024) Glucose and trehalose metabolism through the cyclic pentose phosphate pathway shapes pathogen resistance and host protection in Drosophila. PLoS Biology. https://doi.org/10.1371/journal.pbio.3002299

Lukeš J., Čepička I., Kolísko M. (2024) Evolution: No end in sight for novel incredible (heterotrophic) protists. Current Biology. https://doi.org.10.1016/j.cub.2023.10.065

Krejčová G, Danielová A, Sehadová H, Dyčka F, Kubásek J, Moos M, Bajgar A. (2024) Macrophages play a nutritive role in post-metamorphic maturation in Drosophila. Development. https://doi.org/10.1242/dev.202492

Mora P, Hospodářská M, Chung Voleníková A, Koutecký P, Štundlová J, Dalíková M, Walters JR, Nguyen P. (2024) Sex-biased gene content is associated with sex chromosome turnover in Danaini butterflies. Molecular Ecology. https://doi.org/10.1111/mec.17256

Svobodová K., Krištůfek V., Kubásek J., Krejčí A. (2024) Alcohol extract of the gypsy mushroom (Cortinarius caperatus) inhibits the development of Deformed wing virus infection in western honey bee (Apis mellifera). Journal of Insect Physiology. https://doi.org/10.1016/j.jinsphys.2023.104583

McMullen E, Strych L, Chodakova L, Krebs A, Dolezal T. (2024) JAK/STAT mediated insulin resistance in muscles is essential for effective immune response. Cell Communication and Signaling. https://doi.org/10.1186/s12964-024-01575-0

Bartošová-Sojková P., Butenko A., Richtová J., Fiala I., Oborník M., Lukeš J. (2024) Inside the host: understanding the evolutionary trajectories of intracellular parasitism. Annual Review of Microbiology. https://doi.org/10.1146/annurev-micro-041222-025305

Rouhová L, Podlahová Š, Kmeť P, Žurovec M, Sehadová H, Šauman I. (2024) A comprehensive gene expression analysis of the unique three-layered cocoon of the cecropia moth, Hyalophora cecropia. Insect Biochemistry and Molecular Biology. https://doi.org/10.1016/j.ibmb.2024.104152

2023

Krejčová G, Morgantini C, Zemanová H, Lauschke VM, Kovářová J, Kubásek J, Nedbalová P, Kamps-Hughes N, Moos M, Aouadi M, Doležal T and Bajgar A. (2023) Macrophage-derived insulin antagonist ImpL2 induces lipoprotein mobilization uponbacterial infection. The EMBO Journal. e114086|2023. doi.10.15252/embj.2023114086

Smykal V, Chodakova L, Hejnikova M, Briedikova K, Wu BCH, Vaneckova H, Chen P, Janovska A, Kyjakova P, Vacha M, Dolezel D. (2023) Steroid receptor coactivator TAIMAN is a new modulator of insect circadian clock. PLOS Genetics 19(9): e1010924. doi.org/10.1371/journal.pgen.1010924

Gahurova L, Tomankova J, Cerna P, Bora P, Kubickova M, Virnicchi G, Kovacovicova K, Potesil D, Hruska P, Zdrahal Z, Anger M, Susor A, Bruce AW. (2023) Spatial positioning of preimplantation mouse embryo cells is regulated by mTORC1 and m7G-cap-dependent translation at the 8- to 16-cell transition. Open Biology. doi.org/10.1098/rsob.230081

Svobodová K, Maitre A, Obregón D, Wu-Chuang A, Thaduri S, Locke B, de Miranda JR, Mateos-Hernández L, Bruce Krejčí A, Cabezas-Cruz A. (2023) Gut microbiota assembly of Gotland varroa-surviving honey bees excludes major viral pathogens. Microbiological Research. 274:127418. doi.org/10.1016/j.micres.2023.127418

Jayakodi M, Golicz AA, Kreplak J, Fechete LI, ..., Koblížková A, Neumann P, Novák P, Avila Robledillo L, Macas J, et al. (2023) The giant diploid faba genome unlocks variation in a global protein crop Nature 615 (7953): 652–659. doi:10.1038/s41586-023-05791-5

Macas J, Avila Robledillo L, Kreplak J, Novák P, Koblížková A, Vrbová I, Burstin J, Neumann P. (2023) Assembly of the 81.6 Mb centromere of pea chromosome 6 elucidates the structure and evolution of metapolycentric chromosomes. PLoS Genetics 19(2): e1010633. doi:10.1371/journal.pgen.1010633

Zeiner A, Colina F, Citterico M, Wrzaczek M. (2023) CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASES: their evolution, structure, and roles in stress response and development. Journal of Experimental Botany on-line first: doi:10.1093/jxb/erad236

Bruce Krejčí A, Votýpková K, Lukeš J, Votýpka J. (2023) Varroa destructor Trends in Parasitology 39: 487-488. doi:10.1016/j.pt.2023.03.009

Ho Chan T, Picard-Sánchez M, Majstorović J, Rebl A, Koczan D, Dycka F, Holzer A, Korytář T. (2023) Red blood cells in proliferative kidney disease-rainbow trout (Oncorhynchus mykiss) infected by Tetracapsuloides bryosalmonae harbor IgM(+) red blood cells Frontiers in Immunology 14: 1041325. doi:10.3389/fimmu.2023.1041325

Kachale A, Pavliková Z, Nenarokova A, Roithová A, Durante I, Miletínová P, Záhonová K, Nenarokov S, Votýpka J, Horáková E, Ross RL, Yurchenko V, Beznosková P, Paris Z, Valášek LS, Lukeš J. (2023) Short tRNA anticodon stem and mutant eRF1 allow stop codon reassignment. Nature 613: 751–758. doi:10.1038/s41586-022-05584-2

Muñoz-Gómez SA, Cadena L, Gardiner AT, Leger MM, Sheikh S, Connell LB, Bílý T, Kopejtka K, Beatty T, Koblížek M, Roger A, Slamovits CH, Lukeš J, Hashimi H. (2023) Intracytoplasmic-membrane development in alphaproteobacteria involves the homolog of the mitochondrial crista-developing protein Mic60. Current Biology 33: 1099 - 1111. doi: 10.1016/j.cub.2023.02.059

Obiol A, López-Escardó D, Salomaki E, Wisniewska M, Forn I, Sà E, Vaqué D, Kolísko M, Massana R. (2023) Gene expression dynamics of natural assemblages of heterotrophic flagellates during bacterivory Microbiome 11: 134. doi:10.1186/s40168-023-01571-5

Sheikh S, Pánek T, Gahura O, Týč J, Záhonová K, Lukeš J, Eliáš M, Hashimi H. (2023) A novel group of dynamin-related proteins shared by eukaryotes and giant viruses is able to remodel mitochondria from within the matrix Molecular Biology and Evolution 40: msad134. doi:10.1093/molbev/msad134

Wong J, Panicucci Zíková A, Gahura O. (2023) The ancestral shape of the access proton path of mitochondrial ATP synthases revealed by a split subunit-a. Molecular Biology and Evolution 40: msad146. doi: 10.1093/molbev/msad146

Bajgar A, Krejčová G. (2023) On the origin of macrophage functional versatility. Frontiers in Physiology 14:1128984. doi: 10.3389/fphys.2023.1128984

Dalíková M, Provazníková I, Provazník J, Grof-Tisza P, Pepi A, Nguyen P. (2023) The role of repetitive sequences in repatterning of major ribosomal DNA clusters in Lepidoptera. Genome Biology and Evolution 15: evad090. doi:10.1093/gbe/evad090

Hejníčková M, Dalíková M, Zrzavá M, Marec F, Lorite P, Montiel EE. (2023) Accumulation of retrotransposons contributes to W chromosome differentiation in the willow beauty Peribatodes rhomboidaria (Lepidoptera: Geometridae). Scientific Reports 13: 534. doi:10.1038/s41598-023-27757-3

Kaniewska M, Chvalová D, Doležel D. (2023) Impact of photoperiod and functional clock on male diapause in cryptochrome and pdf mutants in the linden bug Pyrrhocoris apterus. Journal of Comparative Physiology A. Early View: doi:10.1007/s00359-023-01647-5

Pospíšilová K, Van ’t Hof A, Yoshido A, Kružíková R, Visser S, Zrzavá M, Bobryshava K, Dalíková M, Marec F. (2023) Masculinizer gene controls male sex determination in the codling moth, Cydia pomonella. Insect Biochemistry and Molecular Biology 160: 103991. doi:10.1016/j.ibmb.2023.103991

2022

Tumova S, Milacek M, Snajdr I and Jindra M. Unique peptidic agonists of a juvenile hormone receptor with species-specific effects on insect development and reproduction. PNAS 119 (48) e2215541119.  doi.org/10.1073/pnas.2215541119

Kubásek J, Svobodová K, Půta F, Bruce Krejčí A. Honeybees control the gas permeability of brood and honey cappings. iScience 25(11):105445. doi.org/10.1016/j.isci.2022.105445

Domínguez-Martín MA, Sauer PV, Kirst H, Sutter M, Bína M, Greber BJ, Nogales E, Polívka T, Kerfeld CA. Structures of a phycobilisome in light-harvesting and photoprotected states. Nature 609, 835–845 (2022). doi.org/10.1038/s41586-022-05156-4

Kotwica-Rolinska J, Chodáková L. Smýkal V, Damulewicz M, Provazník J, Wu C, Hejníková M, Chvalová D, Doležel D. (2022) Loss of Timeless Underlies an Evolutionary Transition within the Circadian Clock. Molecular Biology and Evolution 39: msab346. doi:10.1093/molbev/msab346

Kotwica-Rolinska J, Damulewicz M, Chodáková L, Krištofová L, Doležel D. (2022) Pigment dispersing factor is a circadian clock output and regulates photoperiodic response in the linden bug, Pyrrhocoris apterus. Frontiers in Physiology 13: 884909. doi:10.3389/fphys.2022.884909

Maaroufi H, Pauchová L, Lin YH, Wu C, Rouhová L, Kučerová L, Marques Cota Vieira LM, Renner M, Sehadová H, Hradilová M, Žurovec M. (2022) Mutation in Drosophila concentrative nucleoside transporter 1 alters spermatid maturation and mating behavior. Frontiers in Cell and Developmental Biology 10:945572. doi:10.3389/fcell.2022.945572

Rouhová L, Sehadová H, Pauchová L, Hradilová M, Žurovcová M, Šerý M, Rindoš M, Žurovec M. (2022) Using the multi-omics approach to reveal the silk composition in Plectrocnemia conspersa. Frontiers in Molecular Biosciences 9:945239. doi:10.3389/fmolb.2022.945239

Štundlová J, Hospodářská M, Lukšíková K, Volenikova A, Pavlica T, Altmanová M, Richter A, Reichard M, Dalíková M, Pelikánová Š, Marta A, Simanovsky SA, Hiřman M, Jankásek M, Dvořák T, Bohlen J, Ráb P., Englert C, Nguyen P, Sember A. (2022) Sex chromosome differentiation via changes in the Y chromosome repeat landscape in African annual killifishes Nothobranchius furzeri and N. kadleci. Chromosome Research 30: 309-33. doi:10.1007/s10577-022-09707-3

Thakkar N, Giesecke A, Bazalová O, Martinek J, Smýkal V, Stanewsky R., Doležel D. (2022) Evolution of casein kinase 1 and functional analysis of new doubletime mutants in Frontiers in Physiology 13: article number: 1062632. doi:10.3389/fphys.2022.1062632

Voleníková A, Nguyen P, Davey P, Sehadová H, Kludkiewicz B, Koutecky P, Walters JR, Roessingh P, Provazníková I, Šerý M, Žurovcová M, Hradilova M, Rouhová L, Žurovec M. (2022) Genome sequence and silkomics of the spindle ermine moth, Yponomeuta cagnagella, representing the early diverging lineage of the ditrysian Lepidoptera. Communications Biology 5: 1281. doi:10.1038/s42003-022-04240-9

Wu C, Šauman I, Maaroufi H, Žaloudíková A, Žurovcová M, Kludkiewicz B, Hradilova M, Žurovec M. (2022) Characterization of silk genes in Ephestia kuehniella and Galleria mellonella revealed duplication of sericin genes and highly divergent sequences encoding fibroin heavy chains. Frontiers in Molecular Biosciences 9:1023381. doi: 10.3389/fmolb.2022.1023381

Benz C, Muller N, Kaltenbrunner S, Váchová H , Vancová M, Lukeš J, Varga V, Hashimi H. (2022) Kinetoplastid-specific X2-family kinesins interact with a kinesin-like pleckstrin homology domain protein that localizes to the trypanosomal microtubule quartet Molecular Microbiology 118: 155–174. doi: 10.1111/mmi.14958

Gahura O, Chauhan P, Panicucci Zíková A. (2022) Mechanisms and players of mitoribosomal biogenesis revealed in trypanosomatids Trends in Parasitology 38: 1053-1067. doi: 10.1016/j.pt.2022.08.010

Gahura O, Mühleip A, Hierro-Yap C, Panicucci B, Jain M, Hollaus D, Slapničková M., Panicucci Zíková A, Amunts A. (2022) An ancestral interaction module promotes oligomerization in divergent mitochondrial ATP synthases Nature Communications 13:5989. doi:10.1038/s41467-022-33588-z

Hegedüsová E, Maršalová V, Kulkarni S, Paris Z. (2022) Trafficking and/or division: Distinct roles of nucleoporins based on their location within the nuclear pore complex RNA Biology 19: 650–661. doi:10.1080/15476286.2022.2067711

Kaurov I, Heller J, Deisenhammer S, Potěšil D, Zdráhal Z, Hashimi H. (2022) The essential cysteines in the CIPC motif of the thioredoxin-like Trypanosoma brucei MICOS subunit TbMic20 do not form an intramolecular disulfide bridge in vivo Molecular and Biochemical Parasitology 248: 111463. doi:10.1016/j.molbiopara.2022.111463

Selinger M, Věchtová P, Tykalová H, Ošlejšková P, Rumlová M, Štěrba J, Grubhoffer L. (2022) Integrative RNA profiling of TBEV-infected neurons and astrocytes reveals potential pathogenic effectors Computational and Structural Biotechnology Journal 20: 2759-2777. doi:10.1016/j.csbj.2022.05.052

Hofstatter PG, Thangavel G, Lux T, Neumann P, Vondrak T, Novák P, Zhang M, Costa L, Castellani M, Scott A, Toegelová H, Fuchs J, Mata-Sucre Y, Dias Y, Vanzela A, Huettel B, Almeida CCS, Šimková H, Souza G, Pedrosa-Harand A, Macas J, Mayer K, Houben A, Marques A. (2022) Repeat-based holocentromeres influence genome architecture and karyotype evolution Cell 185: 1-16. doi:10.1016/j.cell.2022.06.045

2021

Bora P , Gahurova L, Hauserova A, Stiborova M, Collier R, Potěšil D, Zdráhal Z and Bruce AW. DDX21 is a p38-MAPK sensitive nucleolar protein necessary for mouse preimplantation embryo development and cell-fate specification. Open Biology 7:210092 (2021). doi/10.1098/rsob.210092

Bora P, Gahurova L, Mašek T, Hauserova A, Potěšil D, Jansova D, Susor A, Zdráhal Z, Ajduk A, Pospíšek M and Bruce AW. p38-MAPK-mediated translation regulation during early blastocyst development is required for primitive endoderm differentiation in mice. Commun. Biol. 4:788 (2021). doi.org/10.1038/s42003-021-02290-z

Bajgar A, Krejcova G, Dolezal T. Polarization of Macrophages in Insects: Opening Gates for Immuno-Metabolic Research. Front Cell Dev Biol 9: 629238. (2021) doi/10.3389/fcell.2021.629238.

Sember A, Nguyen P, Perez MF, Altmanová M, Ráb P, Cioffi MB. Multiple sex chromosomes in teleost fishes from a cytogenetic perspective: state of the art and future challenges. Philos Trans R Soc Lond B Biol Sci. (2021) doi/10.1098/rstb.2020.0098

Ávila Herrera IM, Král J, Pastuchová M, Forman M, Musilová J, Kořínková T, Šťáhlavský F, Zrzavá M, Nguyen P, Just P, Haddad C, Hiřman M, Koubová M, Sadílek D, Huber BA. Evolutionary pattern of karyotypes, sex chromosomes, nucleolus organizer regions, and meiosis in pholcid spiders (Araneae: Pholcidae): implications for reconstructing karyotype evolution of araneomorph spiders. BMC Evol Biol. (2021) doi/10.1186/s12862-021-01750-8

 

2020

Virnicchi G, Bora P, Gahurova L, Šušor A and Bruce AW. Wwc2 is a novel cell division regulator during preimplantation mouse embryo lineage formation and oogenesis. Front. Cell. Dev. Biol. 8:857 (2020). doi.org/10.3389/fcell.2020.00857

Del Llano E, Masek T, Gahurova L, Pospisek M, Koncicka M, Jindrova A, Jansova D, Iappan R, Roucova K, Bruce AW, Kubelka M and Susor A. Age-related differences in the translational landscape of mammalian oocytes. Aging Cell e13231 (2020). doi.org/10.1111/acel.13231

Yoshido A, Šíchová J, Pospíšilová K, Nguyen P, Voleníková A, Šafář J, Provazník J, Vila R, Marec F. Evolution of multiple sex chromosomes associated with dynamic genome reshuffling in Leptidea wood white butterflies. Heredity 125: 138–154. (2020) doi.org/10.1038/s41437-020-0325-9

2019

Bora P, Thamodaran V, Šušor A and Bruce AW. p38-mitogen activated kinases mediate a developmental regulatory response to amino acid depletion and associated oxidative stress in mouse blastocyst embryos. Front. Cell. Dev. Biol. 7:276 (2019). doi.org/10.3389/fcell.2019.00276

Krejcova G, Danielova A, Nedbalova P, Kazek M, Strych L, Chawla G, Tennessen JM, Lieskovská J, Jindra M, Dolezal T, Bajgar A. Drosophila macrophages switch to aerobic glycolysis to mount effective antibacterial defense. eLife 14;8. pii: e50414. (2019) doi/10.7554/eLife.50414.

Dolezal T, Krejcova G, Bajgar A, Nedbalova P, Strasser P. Molecular regulations of metabolism during immune response in insects. Insect Biochem Mol Biol 109:31-42. (2019). doi/10.1016/j.ibmb.2019.04.005

Bajgar, A., Salon, I., Krejcova, G., et al. Yeast glucan particles enable intracellular protein delivery in Drosophila without compromising the immune system. Biomaterial Sci. 7 (11) 4708-4719. (2019) doi.org/10.1039/C9BM00539K

Morgantini, C.,..., Krejcova, G, Bajgar, A, Aouadi, M.  Liver macrophages regulate systemic metabolism through non- inflammatory factors. Nat. Metab. 1 (4): 445-459 (2019) doi/10.1038/s42255-019-0044-9

Meccariello A., Salvemini M., Primo P., Hall B., Koskinioti P., Dalíková M., et al. Maleness-on-the-Y (MoY) orchestrates male sex determination in major agricultural fruit fly pests. Science 27 : eaax1318. (2019) doi/10.1126/science.aax1318

Carabajal Paladino LZ, Hladová I, Berger M, Bass C, Aratchige NS, López SN, Marec F, Nguyen P. Sex chromosome turnover in moths of the diverse superfamily Gelechioidea. Genome Biol Evol 11:1307–1319. (2019) doi/10.1093/gbe/evz075

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Written by Marek Kincl on . Posted in PRF.

P2 - Provision on English examinations at FSci USB in Bachelor's and Master's studies

Provision on English examinations at FSci USB
in Bachelor's and Master's studies

Provision of Vice-dean No. P2 

Starting points:

  1. English is currently perceived as the world’s lingua franca at all levels. It is a necessary condition for the employment of a university-educated person.
  2. The final examination in English at the Bachelor's degree level is focused on general language and in the Master's degree programme it is focused on academic language.

  1. Advancement Examination

The examination is taken at the end of the first year (second semester) and is primarily a motivation for beginning students. The examination is at level A2 of the Common European Framework of Reference (CEFR) and tests the skills that students should master after completing two semesters of BA1 and BA1NS. The exam consists of three parts: grammar, listening, and reading. The total duration is 75 minutes.

  1. Final Bachelor's Examination in English

The Final Bachelor's Examination in English is in written form and examines mainly receptive skills - the ability to understand written and spoken text and a mastery of grammar and vocabulary at the B2 level according to CEFR. It is divided into four parts: listening, grammar, vocabulary, and working with text. Each part is evaluated by a maximum of 30 points (120 in total). Duration is 120 minutes without a break.

In the listening part, two recordings of texts read by native speakers are included. When listening to the first recording, students complete the missing information in a text. When listening to the second recording with a general theme, students answer multiple choice questions. The first recording is played once, the second twice.

There are a total of 30 items in the grammar section, answered as multiple choice, where the task of students is to determine the correct expression, of which only one is correct.

The vocabulary test tests the mastery of vocabulary from study texts in the previous four semesters based on the use of synonyms, paraphrasing, and the use of words in context.

In the part involving work with texts, students work on several texts. Overall comprehension, information retrieval, and vocabulary are tested. Students answer questions, fill in missing parts according to the context, and look for synonyms.

  1. Final Master's Examination in English

The Final Master's Examination in English primarily verifies the ability to explain and defend one's opinion in English. In addition to receptive skills, it also tests productive skills, and focuses on academic language. It is at level C1 according to SERR and consists of three parts: TOEFL ITP, essays, and an oral part.

TOEFL ITP

The TOEFL ITP Examination tests the student's ability to participate effectively in an English-speaking academic environment.

The listening part focuses on understanding short and medium-length dialogues from the university environment and medium-length lectures.

The second part, sentence structures, verifies the knowledge of correct grammatical structures.

The reading section contains five short excerpts from university scripts and the questions associated with them focus on the overall comprehension of the text and vocabulary work.

Essay

This part verifies the student's ability to argue clearly and logically in writing in English. Students write the essay on a computer in a Microsoft Word text editor and have at their disposal an online version of the Oxford Advanced Learner's Dictionary.

The essay is an expression of agreement/disagreement with a general controversial topic, where students choose one of two topics. The optimal length is 400 words (but at least 300) and the duration of this part is 120 minutes.

Completion of the task (expression of opinion, argumentation, examples, explanations), organisation of the text (introduction, logical division into paragraphs, conclusion), formal aspects (unity and coherence), grammar and vocabulary are evaluated. The exam is evaluated independently by two evaluators.

Oral part

In the oral part, the student demonstrates their ability to express their opinion in English, participate in discussions and argue. The exam consists of two parts - a separate monologue (3 minutes) and a discussion with the examiner (7 minutes), for a total of 10 minutes.

The student draws the topic of the exam the day before the exam. They thus have the opportunity to find the necessary information on the topic in order to be able to take a clear position and support it with relevant arguments.

The ability to present the topic without the aid of the interlocutor, the ability to debate the topic with the interlocutor, the correctness of the grammar used, the use of advanced vocabulary including conjunctions, neutral language style, fluency, pronunciation, and intonation are assessed. The exam is evaluated independently by two evaluators.

  1. Final Examination for Combined Study

All combined study students must pass a foreign language exam during their studies. They have a choice of English, German, Russian, French, and Spanish. The exam is in written form and is at the A2 level according to CEFR. It consists of grammar, listening, and reading. The length of the test is 75 minutes.

  1. Recognition of certificates for language exams

The certificates below are recognized for each examination. For a recognised examination, the student receives an evaluation of "excellent" (this does not apply to the Final Master's Examination in English) and the corresponding number of credits.

Advancement Examination in English

The following certificates at the A2 level (according to SERR) and higher are recognized as a substitute for the English progress test:

Cambridge ESOL: KET – Key English Test

City & Guilds:  IESOL – Access

Recognition of additional certificates at level A2 and higher is subject to individual assessment by the Head of the Language Department.

Final Bachelor's Examination in English

The following certificates at level B2 (according to CEFR) and higher are recognized as a substitute for the Final Bachelor's Examination in English:

Cambridge ESOL:       FCE

City & Guilds:            IESOL – Communicator

IELTS:                      score of 5 or more

Recognition of additional certificates at level B2 and higher is subject to individual assessment by the Head of the Language Department.

Final Examination in a Foreign Language for Combined Study

Recognition of certificates for the Final Examination in a Foreign Language for Combined Study in English, German, Russian, French, and Spanish is subject to individual assessment by the Head of the Language Department.

Final Master's Examination in English

The TOEFL ITP exam, which is part of the Final Master's Examination in English and is taken directly at the Faculty, is accepted as equivalent to the TOEFL iBT or IELTS examination with the corresponding score.

In České Budějovice on September 16, 2016

 

Doc. RNDr. Šárka Klementová, CSc.

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Written by Richard Sefl on . Posted in PRF.

Labs

  • Seznam štítků: PŘF

Department of Computer Science

There are a total of 6 laboratories in our department. These are advanced research facilities. Here you will find the 3D Modeling and Additive Manufacturing Laboratory, the Communication Systems and IoT Laboratory, the Embedded Systems and UAV Laboratory, the Artificial Intelligence Laboratory (AI Lab), the Applied Development and Research Laboratory, and the Bioinformatics Laboratory.

  • Laboratory of 3D modeling and additive manufacturing

    The 3D modelling and additive manufacturing laboratory is closely linked to the embedded systems and UAV laboratory. The main focus of the laboratory is to support the activities and projects of the Faculty, the University and the Biological Centre of the Academy of Sciences. We specialize in prototype design and fabrication, technology and materials research. We carry out the creation of complex 3D models, their analysis and optimization.

    Lab members:

    Mgr. Geyer Jakub
    PhDr. Milan Novák, Ph.D.

    Technology

    The primary technology of the 3D modelling and additive manufacturing laboratory is 3D printing. We focus mainly to printers from the Czech manufacturer Prusa Research in the areas of FFF (fused filament fabrication) and SLA (stereolithography). We have our own modifications of these printers, e.g. Prusa i3 MK3 with double printing area or modified Prusa MMU2 (multi-material upgrade). Thanks to this we are able to print not only from common materials (e.g. PET, PLA, ABS) but also from filaments with additives (e.g. wood, carbon fiber, etc.) or more demanding materials (nylon, polycarbonate, flexible TPE/TPU, etc.) and using soluble supports. For example, we often print from PET-G with carbon fibre, FRJet (PET-G with flame retardant - flame retardant) and HT-CPE. On SLA printers, we create highly detailed parts on which we can realize specific properties (heat resistance, desired flexibility, etc.) thanks to mixing resins.
    3D printing (additive manufacturing process) can also be conveniently combined with subtractive manufacturing processes (CNC, laser cutting, etc.) to realize complex prototypes.

    7443m-2

    The large-format CO2 Laser (XM1490) enables precise cutting of materials such as polycarbonate, PET or wood. It also enables engraving of these materials and glass; or, with the use of special varnishes, permanent marking/describing of metals.
    Power: 150W, Max. material width: 140cm

    7444m-2

    CNC milling machine (High-Z S-720/T) is used for precision machining of plastic, metal or wooden parts. It is also suitable for modification of already existing parts (drilling holes, milling pockets, etc.).
     Max. area 70x40x15cm.

    7439m 

    Software overview
    OnShape, Fusion360, SolidWorks, FreeCAD, Blender, SketchUp, PrusaSlicer, Cura, Simplify3D, Meshmixer, OctoPrint, Meshroom, VXelements, ConstruCAM, WinPC-NC, LightBurn, a další

    Publications and outputs

    Publications

    Novák M., Geyer J., et al. (2021) Construction of a Multisensor UAV System for Early Detection of Forest Pests. In: Shakhovska N., Medykovskyy M.O. (eds) Advances in Intelligent Systems and Computing V. CSIT 2020. Advances in Intelligent Systems and Computing, vol 1293. Springer, Cham. https://doi.org/10.1007/978-3-030-63270-0_78

    Příručka 3D modelování a tisk pro SŠ a příručka 3D modelování a tisk pro ZŠ, Impuls pro kariéru, 2021

    Patents, utility models
    Patent: Digital remote control of analog potentiometers for guitar amplifier (EP 19160447.9, 2021), Ptáček L., Novák M.
    Užitný vzor: Systém ke sledování kůrovcových aktivit (U1: 35641, 2021), Novák M., Ptáček L., Doležal P., Geyer J., Davídková M.

    Final Thesis
    Beránek Karel, Modifikace 3D tiskárny Prusa i3 MK3 na uzavřený koncept s dvojnásobnou tiskovou plochou
    Čechová Jana, Tvorba 3D modelů existujících budov
    Scholz Luděk, Systém pro řízení chytré domácnosti
    Švarc Jakub, Konstrukce a řízení kolového robotického prostředku (probíhající)
    Trtílek Ondřej, Konstrukce robotické ruky pro mobilní podvozek (probíhající)

      

  • Laboratory of embedded systems and UAVs

    The laboratory provides facilities for projects focused on embedded systems, electronics, robotics, and unmanned systems. The laboratory participates in the development of specific systems for sub-projects in cooperation with other parts of the Faculty of Science. These are mainly sensor systems for unmanned vehicles, control and automation systems, etc.

    The Embedded Systems and UAV Laboratory has several unmanned machines:

    1. DJI Matrice 600Pro
    2. DJI S1000
    3. DJI Phantom 4 Adv

    In addition to these machines, which are used to acquire mostly environmental data, we are developing our own UAVs for special applications using Pixhawk autopilots.

    We use the CrazyFlie platform for algorithm testing and teaching.

    Unmanned vehicles are carriers for sensors that are used depending on data acquisition needs: The most common are WIRIS 2gn thermal cameras, WIRIS PRO, spectral and hyperspectral cameras or specific sensors.

    To develop specific devices such as sensor networks, electronic components or sensors for UAVs are available in the laboratory:

    1. Oscilloscopes.
    2. Spectrum analyzer.
    3. Generators.
    4. Soldering stations.
    5. CNC milling machine LPKF E44 for PCB production.
    6. And everything needed to work with processors to create prototype devices.

    The laboratory also has an experimental photovoltaic power plant for testing electronics for active cooling of FVP, etc.

    IMG_7927.jpegIMG_7926.jpegIMG_4941.jpegIMG_5159.jpegIMG_4943.jpegIMG_6682.jpgIMG_5899.jpgIMG_5151.jpgIMG_2721.jpeg

  • Communication Systems Laboratory

    The team deals with the design, simulation, measurement and management of simple as well as complex network infrastructures, including transmission systems. This includes both wired, primarily optical, and wireless transmission technologies. The team also addresses sensor systems and collaborates in data acquisition and analysis with the Information Theory and Learning Systems team and in design and hardware with the Embedded Systems and Additive Manufacturing team. The team operates a laboratory Communication systems and IoT.

    Team Leader:

    Ing. Rudolf Vohnout, Ph.D.

    Examples of projects:

    SmartGrid – Chytré sítě ve venkovských oblastech a MSP, projekt č. 144, přeshraniční spolupráce Česká republika - Svobodný stát Bavorsko Cíl EÚS 2014 – 2020. Více na: http://smartgrid.science/

    ELIXIR CZ – Česká národní infrastruktura pro biologická data, projekt velké výzkumné infrastruktury, ID  LM2015047 +  LM2018131. Řešení společně s týmem Bioinformatiky. Více na: https://elixir-czech.cz/

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Studies

Department of Medical Biology

For students

Studies at KME

  • Study system

    All necessary information regarding the obligations and rights of students at the Faculty of Science can be found in the Dean's Measure No. D 48:

    Studies at the JU CB Faculty of Science are governed by the current JU Study Regulations:

    The organisation of the school year is governed by the academic calendar for the school year.

    All three documents describe in detail the organization, conditions and course of study, examinations and credits, obligations and rights of JU students. It is therefore highly advisable to study those documents or seek answers to your questions directly in these documents.

  • List of lecturers

    The Department provides teaching of most of the compulsory courses of the Bachelor's degree in BLT and Master's degree in Clinical Biology. Courses are taught by both academic and clinical staff.

    Name and specialization

    Workplace

    Phone number/E-mail

    Room

    BROŽ Pavel, MUDr.

    Clinical biochemistry

    University Hospital Plzeň

    This email address is being protected from spambots. You need JavaScript enabled to view it.

    377 104 243

     

    BYSTŘICKÁ Dagmar, Mgr., Ph.D.

    Medical genetics

    GENLABS s.r.o.

    This email address is being protected from spambots. You need JavaScript enabled to view it.

    603 286 725

     

     

    EYER, Luděk, Mgr., Ph.D.

    Microbial diagnostics

    VÚVeL Brno

    This email address is being protected from spambots. You need JavaScript enabled to view it.

    777 781 911

     

     

    CHMELAŘ Jindřich, RNDr., Ph.D.

    Immunology, inflammation

    PřF JU (FSci USB)

    This email address is being protected from spambots. You need JavaScript enabled to view it.

    *6278

    C-02-061

     

    CHMELÍK Václav, prim., MUDr.

    Infectious disease medicine

    The ČB Hospital

    This email address is being protected from spambots. You need JavaScript enabled to view it.

    387 874 601

     

     

    JANOVSKÁ Radmila, MUDr.

    Histology, Pathologic anatomy

    The ČB Hospital

    This email address is being protected from spambots. You need JavaScript enabled to view it.

    387 873 466

     

     

    JIRKŮ-POMAJBÍKOVÁ Kateřina, MVDr. Ph.D.

    Immunology of parasitoses, functional anatomy

    PaÚ BC AV ČR

    This email address is being protected from spambots. You need JavaScript enabled to view it.

    *5470

     

    KOPECKÝ Jan, prof. RNDr., CSc.

    Immunology, Immunology of viruses and parasitoses

    PřF JU (FSci USB)

    This email address is being protected from spambots. You need JavaScript enabled to view it.

    *6274

    C-02-038

     

    KOVÁŘ Jan, RNDr., CSc.

    Lipoprotein metabolism, Atherosclerosis

    IKEM

    This email address is being protected from spambots. You need JavaScript enabled to view it.

    236 053 369

     

     

    LANGHANSOVÁ Helena, RNDr., Ph.D.

    Immunology, experimental animals in biomedical research

    PřF JU (FSci USB)

    This email address is being protected from spambots. You need JavaScript enabled to view it.

    *6291

    C-02-039

     

    LIESKOVSKÁ Jaroslava, Mgr., Ph.D.

    Molecular immunology, Virology

    PřF JU (FSci USB)

    This email address is being protected from spambots. You need JavaScript enabled to view it.

    *6291

    C-02-039

     

    POLÁKOVÁ Simona, Mgr.

    Biostatistics

     

    This email address is being protected from spambots. You need JavaScript enabled to view it.

    605 430 008

     

     

    RŮŽEK Daniel, doc. RNDr., Ph.D.

    Medical virology

    VÚVeL Brno

    This email address is being protected from spambots. You need JavaScript enabled to view it.

    777 786 218

     

     

    SUMOVÁ Alena, PharmDr., CSc., DSc.

    Human biorhythms

    FGÚ AV ČR, Praha

    This email address is being protected from spambots. You need JavaScript enabled to view it.

    241 062 528

     

     

    ŠTĚRBA Jan, RNDr., Ph.D.

    Pharmacology and toxicology

    PřF JU (FSci USB)

    This email address is being protected from spambots. You need JavaScript enabled to view it.

    *6220 

    C-01-008

     

    VERNER Miroslav, prim. MUDr.

    Clinical biochemistry

    The ČB Hospital

    This email address is being protected from spambots. You need JavaScript enabled to view it. 

    387 873 500

     

     

    VONDRÁKOVÁ Jana, MUDr., Ph.D.

    Laboratory haematology

    The ČB Hospital

    This email address is being protected from spambots. You need JavaScript enabled to view it.

    387 873 558, 387 873 581

     

     

    VONKE Ivan, prim. MUDr.

    Clinical haematology

    The ČB Hospital

    This email address is being protected from spambots. You need JavaScript enabled to view it.

    387 873 561

     

     

    VOSÁTKOVÁ Michala

    Clinical Endocrinology, Pathophysiology

    EÚ Praha

    This email address is being protected from spambots. You need JavaScript enabled to view it.

    224 905 244

     

     

    WEYDA František, doc. RNDr, CSc.

    Morphology and histology of arthropods, electron and light microscopy

    PřF JU (FSci USB)

    This email address is being protected from spambots. You need JavaScript enabled to view it.

    606 651 179

     

     

    ŽAMPACH Pavel, MUDr.

    Clinical immunology

    The ČB Hospital

    This email address is being protected from spambots. You need JavaScript enabled to view it.

    387 873 611

     

     

    ŽAMPACHOVÁ Eva, MUDr.

    Medical microbiology

    Strongwest, a.s., ČB 

    This email address is being protected from spambots. You need JavaScript enabled to view it.

    607 854 614 

     

     

    ŽENKA Jan, RNDr., CSc.

    Tumour immunotherapy

    PřF (FSci USB)

    This email address is being protected from spambots. You need JavaScript enabled to view it.

    *6274, 774 550 724

    C-02-038

     

  • Courses provided by KME

    In the links you will find detailed information about all the courses offered by the Department of Medical Biology and a list of all the lectures at the Faculty of Science as offered by individual departments and institutes within the study programmes. Courses taught in English are marked in bold.

    Kód

    Název

    Kód

    Název
    KME / 060 Lékařská parazitologie pro klin. biology KME / 614 Metody studia buňky
    KME / 062 Statistika v preklin. a klin. výzkumu KME / 615 Cell Line Cultures in Vitro
    KME / 065 Metody mikrobiální diagnostiky KME / 625 Fotografické techniky II.
    KME / 066 Terapie nádorů pro bakaláře KME / 721 Klinická imunologie
    KME / 074 Terapie nádorů pro magistry KME / 722 Klinická biochemie II
    KME / 082 Virology KME / 723 Immunology
    KME / 084 Molek. diag. metody v lék. genetice KME / 724 Laboratorní hematologie
    KME / 085 Základy medicínské biologie KME / 725 Biorytmy člověka
    KME / 085E Introduction into biomedicine KME / 726 Hematologie II.
    KME / 086 Pokusná zvířata v biomedicínském výzkumu KME / 729 Infekční lékařství
    KME / 087 Molekulární imunologie KME / 738 Praxe v klinické laboratoři I.
    KME / 087E Molecular immunology KME / 739 Praxe v klinické laboratoři II.
    KME / 179 Seminář mag. oborů - klinická biologie KME / 740 Histologie
    KME / 213 Základy funkční anatomie člověka KME / 742 Patologická anatomie
    KME / 216 Imunologie KME / 743 Klinická biochemie
    KME / 306 Fotografické techniky I. KME / 744 Trendy v biomedicíně
    KME / 310 Bioanalýza v lékařské diagnostice KME / 745 Biomedicínská laboratorní praxe
    KME / 481 Lékařská mikrobiologie KME / 746 Výživa člověka
    KME / 501 Imunologie parazitóz KME / 747 Patofyziologie
    KME / 603 Lékařská virologie KME / 748 Farmakologie a toxikologie
    KME / 606 Kultivace živočišných buněk a tkání    

  • Practises

    During the Bachelor's and Master's studies, the student is obliged to complete 3 internships in a clinically or diagnostically oriented laboratory (e.g. in the laboratory of clinical biochemistry, histopathology, microbiology, immunology, cytogenetics or other similar fields). It is also possible to visit other specifically focused laboratories in agreement with the Head of Department. The aim of the internship is to familiarize students with the normal workflow of laboratories and the laboratory procedures used.

    During the Bachelor's degree students are obliged to complete Biomedical Laboratory Practise (KME/745) (duration of practice is 8 days) and Clinical Laboratory Practise I (KME/738) (duration of practice is 10 days). In the Master's programme, students take the Clinical Laboratory Practise II (KME/739) (duration again 10 days).

    The place of the internship is of the students' own choice. In České Budějovice, students can complete their internships for example in the České Budějovice Hospital or in one of the private medical laboratories. It is also possible to complete the internship in another EU country. The focus of the departments where the student completes the Biomedical Laboratory Practice, and the Clinical Laboratory Practice I must be different, so it is possible to complete both internships in the same institution, but not in the same department. It is not possible to complete the internship in a research laboratory (e.g. it is not possible to count work in the laboratories of the BC CAS as part of the diploma internship).

    At least one month before the internship, you must arrange the appropriate insurance through the faculty (arranged by Ms. Hana Kabelová - Economic Department, Building C, This email address is being protected from spambots. You need JavaScript enabled to view it., +420 387 776 203).

    In order to receive credit, a certificate of completion of the internship must be submitted to the course supervisor (listed in STAG) for approval. This confirmation should include information about where the student has completed the internship, the duration of the internship, or what methods he/she has become familiar with (a contract between the faculty and the relevant laboratory is not sufficient as a confirmation of completion of the internship).

  • Department seminars

    Students of Biomedical Laboratory Technology, Clinical Biology and Infectious Biology present their bachelor's, master's and dissertation theses at departmental seminars, which run in the winter and summer semesters. The departmental seminars are held as part of the Master's Seminar - Clinical Biology course (KME 179).

    - Bachelor students are required to present the progress and results of their undergraduate thesis at least twice during their studies, which corresponds to 1 time per year since the assignment of the bachelor thesis. The presentation is required to be in the Czech language and to last a maximum of 20 minutes including discussion. For Bachelors, the presentation of results or research is a prerequisite for credit in the course KME/890, reps. KME/891.

    - Master's students are obliged to present their thesis once a year. Presentations (slides) are required in English, speech in Czech. The maximum length of the presentation is 20 minutes including discussion. At the same time, in the semester in which they will be presenting at the seminar, Master's students enrol in KME/179 (Seminar of Master's Degrees - Clinical Biology) and are obliged to attend the seminars (attendance is kept with a maximum of 3 absences).

    - Doctoral students are also required to present the progress and results of their dissertation once a year. Presentations (slides) and speeches are required in English for a maximum of 30 minutes including discussion.

     In case students defend their thesis in a department or institute other than KME, they will have to present the progress and results of their thesis in a seminar of the respective department in which they will defend. However, a presentation at the KME seminar is still required.

    Presentation structure requirements:

    • Introduction / Introduction
      • Introduction to the topic of the student's thesis, i.e. a summary of current knowledge on the topic in relation to the aim/objectives of the student's thesis
      • this knowledge should come from the scientific literature (peer-reviewed journals)
      • requirements for the number of references used in the introduction:
        • Bachelor student - min. 5 scientific articles, in case of a research paper min. 15-20 scientific articles
        • Master's student - min. 8 scientific articles
        • PhD students - at their discretion
    • Objectives / Aims
      • concise and clearly stated aim or aims of the thesis
    • Material & methods
      • concise summary of methods used
    • Conclusions / Conclusions
      • summary of the results of the work and new findings in relation to the objectives of the work
    • Acknowledgement

  • Medical accreditation

    What is medical accreditation?

    Medical accreditation is required to practice health professions and allows a graduate to be employed in hospitals and other health care facilities. Accreditation applies to approximately 40 legally defined non-medical health professions. Students and graduates of the fields of study provided by the KME, i.e. Biomedical Laboratory Technology (BMLT) and Clinical Biology (KB), are covered by paragraph 1b of §26 of Act No. 96/2004 Coll., which defines the possibilities of obtaining medical accreditation for the exercise of the profession "Professional worker in laboratory methods".

    Extract from Act No 96/2004 Coll. §26:

    (1) Professional competence to exercise the profession of professional worker in laboratory methods and in the preparation of medicinal products is obtained by completing

    (a) an accredited medical master's degree course for the training of a professional in laboratory methods, or

    (b) an accredited Master of Science degree and an accredited qualifying course in professional medical laboratory methods or an accredited qualifying course in laboratory methods in assisted reproduction or an accredited qualifying course in the manufacture, preparation and control of medicinal products; or

    (c) an accredited master's degree in science, electrical engineering or mathematics and an accredited qualification course in professional laboratory methods in the protection and promotion of public health.

    Students in Clinical Biology are referred to in the bolded passages.

    Do the BMLT and KB programs have medical accreditation?

    Due to statutory conditions, it is not practically possible to obtain a health accreditation for a study programme without cooperation with a teaching (university) hospital, which, unfortunately, is not present in České Budějovice. Therefore, the study fields of BMLT and KB do not have medical accreditation, however, this situation is solved by completing an accredited course after successful completion of the Master's degree (see below).

    Note: Currently, there is no accreditation course offered in the Czech Republic that would lead to a medical accreditation after completing only a Bachelor's degree. Such a course would enable the regulated profession of "Healthcare Laboratory Technician" to be practised. Since the accredited course of Health Laboratory Technician is offered at many health-oriented faculties in the Czech Republic, including the ZSF JU CB in České Budějovice, there is no demand for such an accreditation course. Therefore, graduates of the Bachelor's degree in Biomedical Laboratory Technology CANNOT practice the regulated profession of Health Laboratory Technician, nor do they have the opportunity to take the relevant accreditation course! They are required to complete a Master's degree, preferably in Clinical Biology.

    How is this situation solved at the Faculty of Science USB?

    The faculty pays the fee for the accreditation course, which is organized annually by the Faculty of Science of Charles University in Prague (note: this course replaces the previously paid accreditation course organized by the Institute of Postgraduate Education in Health Care, which is currently no longer paid). The faculty contribution is made in the form of an extraordinary scholarship for students completing a Master's degree in Clinical Biology. Students must report to the Head of Department at the beginning of the calendar year that they intend to graduate in that year (or in January of the following year) and personally apply to the Department Head for an Extraordinary Scholarship prior to graduation. After graduation, the exceptional scholarship cannot be paid to the student.

Bachelor study programme

  • Programme Laboratory and Medical biology

    Programme guarantor:

    RNDr. Jindřich Chmelař, Ph.D., e-mail: This email address is being protected from spambots. You need JavaScript enabled to view it., phone: 387 776 278

    Laboratory and Medical Biology is a modern study programme focused on understanding the principles of the functioning of the human body, including its pathologies, at the molecular, cellular, tissue, organ and organismal levels. Students will be introduced to biomedicine as a dynamic and evolving field of science as well as the principles and practices of laboratory diagnostics and bioanalysis. The program provides the knowledge and skills to practically perform a variety of methods in biological or biomedical laboratories. Physicians and hospital laboratory professionals are involved in teaching clinically focused courses, ensuring that the latest trends in medical diagnostics are reflected. Students in the program can practice in collaborating laboratories. They will acquire theoretical knowledge in organic and physical chemistry and biochemistry, molecular and cell biology, genetics or immunology, all with an emphasis on the clinical aspects of these disciplines. In addition, the student will acquire practical skills in the molecular biology, biochemistry and immunology laboratory, and will be able to analyse, statistically evaluate and interpret data obtained by their own measurements. A significant part of the study is devoted to independent creative scientific work, in which the student will learn to navigate the scientific literature, obtain data from available databases, and in the case of experimental work will develop laboratory skills. Graduates of the programme will find employment in research laboratories focused on basic and preclinical biomedical research. Upon completion of the appropriate accreditation course, students may practice the regulated profession of health laboratory technician. They can work in diagnostic and other private laboratories as highly skilled laboratory technicians. Graduates also have the option to pursue a follow-up Master's degree in Clinical Biology, which will further enhance their knowledge and practical skills in medical biology.

    Graduate profile
    You will learn:
    • Use knowledge of organic and physical chemistry, molecular and cell biology and genetics
    • handle cell culture and prepare samples and solutions
    • master state-of-the-art methods based on nucleic acid and protein analysis
    • analyse, interpret and evaluate the data obtained

    Admission procedure
    The criteria for admission are a complete secondary education with a high school diploma and fulfillment of the conditions according to the annual Decision of the Dean of the Faculty of Arts of the JU on the admission of applicants to Bachelor's degree programs.

  • Bachelor thesis

    No later than at the beginning of the fifth semester of study in the Bachelor's degree programme, the student is obliged to choose the topic of the Bachelor's thesis in cooperation with the supervisor and to submit to the study department the Bachelor's thesis assignment protocol with all necessary signatures (download the form HERE). In the fifth semester at the latest, the student must be enrolled in the course Bachelor Thesis Practicum I (FBI/890). In the subsequent semester, the student must enroll in the course Bachelor Thesis Practicum II (FBI/891). If the student is extending his/her studies, he/she enrolls in the course Bachelor Thesis Practicum (FBI/893).

    Even though the student is obliged to choose the topic at the beginning of the fifth semester at the latest, it is recommended that the topic of the bachelor thesis be chosen as early as possible, mainly because of the time demanding nature of some theses (this does not only apply to experimental theses, a sufficient amount of time is also needed for the quality of the research topics).

    The topic of the bachelor thesis is chosen by each student according to his/her own interest. The thesis can be prepared either under the supervision of a supervisor directly from the KME or at one of the cooperating institutes (Biological Centre of the CAS, Department of Chemistry of the JU, etc.). Bachelor theses can also be supervised by external supervisors, e.g. from the České Budějovice Hospital. In the case of external supervisors, it is recommended to pay increased attention to the formal aspect of the thesis to avoid any misunderstandings caused by different requirements set for the thesis by the Faculty of Science and the supervisor (more about the formal requirements for bachelor's and master's theses can be found in the Provision of the Vice-Dean for Study P 5 On the Submission of Bachelor’s, Master’s, and Advanced Master´s Theses at the Faculty of Science, USB - HERE).

    Basic advice on how to proceed correctly when writing a thesis and the most common mistakes to avoid are summarized in the attached presentation.

    The student reports on the course of preparation and partial results of the bachelor thesis at least twice during the study at the departmental seminar (see KME Seminars).

     If students defend their thesis in a department or institute other than KME, they may present the progress and results of their thesis at the seminar of the department in which they will defend. This should be reported to the Head of KME.

    The student submits the bachelor thesis to the study department on the appropriate date (see the Calendar of the academic year). Before submission, students are required to upload the electronic version to the STAG database.

     

  • State final exam

    mmm

Master's programme

  • Programme Clinical biology

    Garant of the study programme:

    Prof. RNDr. Jan Kopecký, CSc.
    email: This email address is being protected from spambots. You need JavaScript enabled to view it.
    phone: +420 387 776 274
    Building C, Přf JU, door 02 038 

    Briefly about the Clinical Biology program

    The Master's program of Clinical Biology enables to acquire a wealth of theoretical knowledge and practical skills and to apply them in practice in carrying out complex methodological procedures in a wide range of laboratories, including the latest diagnostic and analytical methods. A graduate of Clinical Biology is able to interpret and integrate the results of individual laboratory findings and can therefore find employment in leading positions of clinical or diagnostic laboratories (virology, medical genetics, clinical biochemistry, etc.). The program Clinical Biology can be followed by doctoral study and continue scientific work.

    The Clinical Biology study program does not have medical accreditation, this qualification can be obtained by completing an accredited qualification course “Professional Medical Laboratory Methods”.

     Study plan for Clinical Biology

  • Master's thesis

    mm

  • State final exam

    mmm

Doctoral programme

  • Programme Integrative biology

    Graduates of the Master's program in Clinical Biology can follow the PhD program in Integrative Biology. More information here.

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